Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00021 ATGTCTGGAGTAGAAGGAGAAGATGGGAGAAAGAACACGAAGGAAACGGGTGTAGCCGCAGAGACAGAGAAGAACCTTAAGCTGAAAGAACGAAAGGTATCATGGGCAAAGTTAAGACGTATAGATTCTCTGAATTTAGAAGCTGGAAGAGTTTCTATGGTTGCACACAACCCTCACAAGATGGGATGGAGAATTACTCTCAGCTTAGCATTTCAAAGTATAGGAGTTGTATATGGTGATATTGGAACATCACCCCTTTATGTATATGCCAGCACATTCACTGATGGAATCAAGCATAAGGATGATATTCTGGGTGTATTGTCCCTTATCATCTACACCATCCTCCTCATACCTATGATCAAATACGTTTTCATCGTATTATGGGCTAACGATAATGGCAACGGTGGAGCCTTTGCACTCTATTCATTAATATGTAGGCACATAAAAATGAGTTTGATTCCGAATGAACAACCAGAGGATAGGGAGCTTTCTAATTACAAATTAGAAACCCCATCGAGTCAGGTGAAACGGGCTCACAAACTAAAGCAGAAACTCGAGGGCAGTAATGTTGCAAGAGTTGTGCTTGTGCTTCTTGCAATAATGGGAACTTCCATGGTTATAGGAGACGGCATTCTTACTCCATCAATATCAGTACTTTCAGCTGTAAGCGGGATCAGTAAATCATTAGGTCAAGATGCTGTTGTGGGAATCACAATAGCAATTTTAATAGTTCTATTCTCTGTTCAACGTTTTGGTACTGATAAAGTGGGATTCTCATTTGCTCCAATTATTTTGGTGTGGTTTTTGTTCATCGCTGGAATTGGATCTGAGGCTATGTTTGCTGACTTGGGTCACTTTAATGTACGAGCCATTCAGATAAGTTTTTCTTTCATTACATGTCCATCAATCGTGATTGCATACATTGGGCAAGCAGCATATTTGAGAAAGTTTCCTGACAATGTAGCTAATACTTTCTATGATTGCATTCCAGGTCCATTATATTGGCCAACTTTTGTTGTGGCTGTTGCTGCTGCCATTATAGCTAGCCAAGCAATGATTTCGGGAGCATTCTCCATTATATCCCAAGCCCTAAGTCTAGGTTGTTTTCCAAGAGTTAGGGTGGTGCACACTTCCATCAAACATCATGGTCAGGTGTATATTCCTGAAATCAACTACATGTTCATGATCGCATGTATTGTGGTGTGTGCTGCCTTCAAGACCACAGAAAAGATTAGTCATGCATATGGGATTGCAGTTATAGGTGATATGATGATTTCAACAACTCTGGTTTCGCTGATAATGCTTGTTTTATGGAAAAAGAGTCTATGGCGTGTCGCATTGTTCTTCTTTGGATTCGGTTTCATTGAATTGGTTTATTTAACATCTCAATTGACCAAGTTCACAGGAGGAGGATATTTTCCAATTGTATCAGCTATGTTCTTAACGTCGATTATGGGAATCTGGCACTATGTGCACAAGGAAAGATACATGTTTGAGTTAAAAAATAAGGTATCAAGTGCATATCTGAATGAAGTGGCAAACAACCCAGATGTAAGGCGAGTGCCAGGAATTGGACTTTTGTATTCTGAGCTGGTGCAAGGCATTCCTCCCATATTCCCACACCTTATAGCTAGCATTCCATCTGTCCATTCAATTCTTGTATTTGTGTCTATTAAAGCAATTCCGGTGAGTAGTGTTGCATCGGAGGAGAGATTCTTGTTTCGACAAGTGGAGCCAAGAGAGTACAGAGTTTTTCGTTGTGTTGTAAGGCATGGTTACAATGACGTTCTTGGAGATCCTGCCAAGTTTGAGTCAGAATTGATACAAAATCTAAAGACATTCATTCAAGAGGAGAACTACCATATGGTGGAGGTGGAGGGAAGTGGAAATGCAATTGAACAAGCAGTGGTTGAAAGCAGTGATAAAAGGGAAGCACACCGTTCCTCCAGTAGAATAATCCCCAATCAACCAGCATCGACCTCATCCGACTCCATTCGATCATTGGAAGGGAGTGGCACCAAGTCATATGCTAACTTCCTTGCCCCACCCATCCATGGAGCTGAAGAGGAACTCAAATTCATAGAAAAAGCATTGGAGAAAGGCGTGGTGTACATGCTGGCAGAAGCAGAGGTTGTGGCTCACCCAAACTCCTCCATCATCAATAAGATCATTGTGAATTATGTGTATAGTTTCTTCCGAAAGAACTTCAGACAAGGTCAGAGTTCCATGGCAATCCCGCACAAAAGACTTCTCAAGGTTGGGATGACATACGAAATATGA 2280 0.4118 MSGVEGEDGRKNTKETGVAAETEKNLKLKERKVSWAKLRRIDSLNLEAGRVSMVAHNPHKMGWRITLSLAFQSIGVVYGDIGTSPLYVYASTFTDGIKHKDDILGVLSLIIYTILLIPMIKYVFIVLWANDNGNGGAFALYSLICRHIKMSLIPNEQPEDRELSNYKLETPSSQVKRAHKLKQKLEGSNVARVVLVLLAIMGTSMVIGDGILTPSISVLSAVSGISKSLGQDAVVGITIAILIVLFSVQRFGTDKVGFSFAPIILVWFLFIAGIGSEAMFADLGHFNVRAIQISFSFITCPSIVIAYIGQAAYLRKFPDNVANTFYDCIPGPLYWPTFVVAVAAAIIASQAMISGAFSIISQALSLGCFPRVRVVHTSIKHHGQVYIPEINYMFMIACIVVCAAFKTTEKISHAYGIAVIGDMMISTTLVSLIMLVLWKKSLWRVALFFFGFGFIELVYLTSQLTKFTGGGYFPIVSAMFLTSIMGIWHYVHKERYMFELKNKVSSAYLNEVANNPDVRRVPGIGLLYSELVQGIPPIFPHLIASIPSVHSILVFVSIKAIPVSSVASEERFLFRQVEPREYRVFRCVVRHGYNDVLGDPAKFESELIQNLKTFIQEENYHMVEVEGSGNAIEQAVVESSDKREAHRSSSRIIPNQPASTSSDSIRSLEGSGTKSYANFLAPPIHGAEEELKFIEKALEKGVVYMLAEAEVVAHPNSSIINKIIVNYVYSFFRKNFRQGQSSMAIPHKRLLKVGMTYEI 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00021 759 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 275 758 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu10g00021 759 MobiDBLite consensus disorder prediction 1 20 - -
Vimu10g00021 759 MobiDBLite consensus disorder prediction 636 669 - -
Vimu10g00021 759 Pfam K+ potassium transporter 273 595 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu10g00021 759 MobiDBLite consensus disorder prediction 650 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00021 Vimu-Chr10 156474 160464 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00021 27 759 Inorganic Solute Cotransporters AT4G13420 55.084 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00021 K03549 - gmx:100814313 1196.03