Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00020 ATGCTAATCACATATGCCTTTATAGTGGTAGTTGTTTCCCATGATATGAAGACTCGCAGTGCTGAACTTGAAGGTTTAGATAATCGAGTTGAGAAGCTTGAGAAGAAAAGTTCTGAGATGGAAAAACGTTTTGCTGTTGCTGATAAGGATCTGAGGTTATGTTTGCTGACTTTGGTGACTTTAATGTGGAAGCCATTAAGGCCAGCAACATATTTGAGGAAGTTTCCTGACAATGTAGTTAATACTTTCTATGATTGCATTCCACGTCCATTATATTGGCCAACTTTTGTTGTGGTTGTTGCTGCTGCCACTATAGCTAGCCAAGCAATGATTTCAGGAGCATTTTTCATTATATCCCAAGCCCTAAGTCTAGGTTGTTTTCCAAGAGTTAGGGTGGTGCACACTTCCATCAAACATCATGGTCAGGTGTATATTCCTGAAATCAACTACATGTTCATGATCGCATGTATTGTAGTGTGTGCTGCCTTCAAGGCCACAGAAAAGATTAGTCATGCATATGGGATTGCAGTTATAGGTGATATGATGATTTCAACAACTCTGGTTTCGTTGATAATGCTTGTTTTATGGAAAGAGTCTATGGCATGTGACATTGTTCTTCTTTGGATTAAGTTTCATTGA 639 0.3881 MLITYAFIVVVVSHDMKTRSAELEGLDNRVEKLEKKSSEMEKRFAVADKDLRLCLLTLVTLMWKPLRPATYLRKFPDNVVNTFYDCIPRPLYWPTFVVVVAAATIASQAMISGAFFIISQALSLGCFPRVRVVHTSIKHHGQVYIPEINYMFMIACIVVCAAFKATEKISHAYGIAVIGDMMISTTLVSLIMLVLWKESMACDIVLLWIKFH 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00020 212 Pfam K+ potassium transporter 56 207 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu10g00020 212 Coils Coil 16 50 - -
Vimu10g00020 212 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 68 206 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00020 Vimu-Chr10 142943 145356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00020 69 200 Inorganic Solute Cotransporters AT4G13420 68.939 4.16e-58 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00020 K03549 - gmx:100814313 230.72