Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun9347g00001 ATGTCTGTCACTAGTTCATCATTTTTATTCACATTTTCTTTCATTGTTTTCTTCATTTTCTTCATTTTGACAGAAAATTTATCATGCTTAGCAATACTTAAACAGCTTGTTGGTTCAGTCACTTCTCAACAATTCAAAGAATCACCTGTTTCTGGACCTGCCACCATTCGTCTTCTCTTCCATGATTGCTTTGTAGAAGGTTGTGATGCGTCAATTTTAATAGCATCAAAGCCGGGAAGCAAGGAGTTAGCAGAGAAAGATGCAGAGGATAATAAAGATTTGAGAGTGGAAGGTTTTGAGACTATAAAGAAGGCTAAGGAAGTGGTTGAGAGAAAGTGTCCTAATGTAGTGTCTTGTGCAGATATTCTTGCAATTGCAGCAAGAGATTTTGTGCACCTGGCAGGGGGTCCTTATTACCAAGTGAAGAAGGGAAGATGGGATGGAAAGATATCGATGGCGTCGAGGGTTGGGTCGAACATCCCTCGCGCAAACTCAACTATTGACGATCTCGTCAAACTATTCAACTCAAAAGGCTTAACCATACAGGACATGGTTGCTCTTTCTGGTGCTCACACAATCGGGCTCTTAGAATGTATTGTCCAAACTTTGGAGGGAACTCAGACATTGTTGCCCCCGTTTGATGCCACGACACCGTTCATATTTGATCATGCATACTATGTGAAAGTTGTGAGAGGGAAAAAGCATGGGGAGAAAAGAAGAGATTGTAGCATGCATATGTAA 741 0.4103 MSVTSSSFLFTFSFIVFFIFFILTENLSCLAILKQLVGSVTSQQFKESPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRVEGFETIKKAKEVVERKCPNVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTIDDLVKLFNSKGLTIQDMVALSGAHTIGLLECIVQTLEGTQTLLPPFDATTPFIFDHAYYVKVVRGKKHGEKRRDCSMHM 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun9347g00001 246 Pfam Peroxidase 40 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 SUPERFAMILY Heme-dependent peroxidases 35 233 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Vifaun9347g00001 246 Gene3D - 33 161 - -
Vifaun9347g00001 246 ProSiteProfiles Plant heme peroxidase family profile. 33 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vifaun9347g00001 246 Gene3D Peroxidase, domain 2 162 199 - -
Vifaun9347g00001 246 PANTHER - 33 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 FunFam Peroxidase 26 171 - -
Vifaun9347g00001 246 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifaun9347g00001 246 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun9347g00001 33 227 Peroxidase AT2G34060 57.333 2.10e-88 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun9347g00001 K00430 - gmx:100777463 330.102