Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun8733g00002 ATGCCGAGCTTCGCAACGAGGTTTAAAGCTGCAATAAAAAAGATGGATATGCAAGCATCAAAAGAATTCCTAGCCGAACTAAAGGTTCTGACACACGTTCATCACTTGAATTTGGTGCGGCTAATTGGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAATACATTGAGAATGGAAATCTAAGTCAACATTTGCGCGGCACAGGGAAGGATCCATTATCATGGGCAGCTAGAGTTCAAATTGCATTAGACTCAGCAAGAGGACTTGAATACATTCACGAGCATACAGTTCCTGTCTATATACATAGAGATGTTAAATCAGCAAACATTTTGATAGACAAAAACTTCCGCGGAAAGGTTGCGGATTTTGGTTTGACAAAATTGACTGAATATGGTAGCTCCTCGTTACAAACACGCCTTGTCGGGACGTTTGGATATATGCCTCCTGAGTAA 456 0.4057 MPSFATRFKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGTGKDPLSWAARVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun8733g00002 151 Pfam Protein tyrosine and serine/threonine kinase 7 151 IPR001245 GO:0004672|GO:0006468
Vifaun8733g00002 151 SUPERFAMILY Protein kinase-like (PK-like) 7 151 IPR011009 -
Vifaun8733g00002 151 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun8733g00002 151 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Vifaun8733g00002 151 SMART serkin_6 6 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun8733g00002 151 Gene3D Transferase(Phosphotransferase) domain 1 3 151 - -
Vifaun8733g00002 151 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 151 IPR044812 GO:0019199|GO:0045087
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun8733g00002 9 151 Receptor kinase-like Gene Family AT3G21630 80.420 5.04e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vifaun8733g00002 PK_Tyr_Ser-Thr 1.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun8733g00002 - K13429 gmx:100802308 275.789