Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun8278g00004 ATGGGTAAGAAACAGACGCAGCAGAAGATCCTCCTCCCGCCGGACCTCCCACCGGAGATTCCCGACGACGAAGTCGAGTATTCCGACGACGACATCAAATTCGTCAAGGAAAATCGCGCCTTCGCTTCTTTACTCTCCACTTTGGACACTCAATCAATCACCAAGCATGTTACGCGGGTTGCTGATGCGAAAGACGATGTTTTGGAGAAACTCTATGAGCAACGGATGCAAAAGAATGCTCTCAAAAAAGAAAAAGAAGAAACAGGTCTGCAGGTTGATCGAGTCGATGCGCTTCCGGTCAAGACTTTGGATGGGAAAATCTATTTCCGGACAGCTACAAAGACGGCAGCAGTTAATGGTCCAAGTGAAGTGGAAACTGGAGAGGATGACAATGTGGTTAAAAGCTTATTTAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAATTAGGAAAGAGGGGAAAAAACAAGACAAAGAGGTGGCTAAAGAAGAAGTGGAAGAAGCACCACAGGCAGCAGCTTTGGCTGAGGTTGAAGAAGATCTTAAAGTTGAAGAGGCATTTGAAAGTAAAAAGTTTAGGCTTGCAGAATTGGGAAATGCCTTGTTAACAGACCCAGAGTCCAATATTAAAGGTCTGAAGGACATGGTACAGCTATCTAAAGATAATGATCGCACCATTGTTAAACTTGGACTTCTATCCCTTTTGGCTGTTTTCAGAGATATTATTCCTGGCTATCGAATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTATTAGAAAGATGCGTTTTTATGAATCAACTCTCCTCTCTGCATACAAGGCTTACTTGCAAAGGTTGATAGCCTTAGAAAAGCAGCCTTTATTTCAGCTTGTAGCAGTTCGCTGTATTTGTTCTTTGCTTGAATCAAATCCCCATTTCAACTATCGTGAAACCTTGTTGGATGCGACTGTCAGAAACATAAACTCCAGTAATGATGCCATAAGGCAACTTTGCTGTTCCACAATTAAGTCTCTCTTTACAAATGAGGGTAAACATGGTGGTGAAGCTACCGTGGAGGCTGTGCGGTTGATTTCTTATCAGGTTAAAGATCATAATTGCCAGCTGCACCCTGATTCTATTGAGGTTTTCTTATCTCTATCATTTGATGAGGATCTTGGGAAGTCAGAAAAGACAGATAGGGATCAGAAATATAAAAACAAGAAAGATAAGAAAAGGAAACACATGGAGGGATCAAATCAGTTGTCTGAAAATGACAGAAAGAAAAGTAGGCAAGAGTCAATTTCTAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCTTCCTTTACCTTGGATGCCACGGAGAAGAGACAGATGCAAACACAAACACTCTCTGCTGTATTTGAGATGTACTTTCGCATTTTGAAGCATACAATGCAGTCCATAGTTGTCAGGCCTGAAGCAAACCTTGAGGTAGTTTCTGCTGCAGTGGGAGTGGAGCCCCACCCATTGCTCGATCCTTGTCTGAAGGGGCTGGCGAAATTCGCACACTTGATTGACCTTGATTTCCTGGGTGACCTAATGAAACATTTGAAGGTTCTTGCTTCTGGAGGTAGAAACTTAGGCAACACATCTGAGAAGTTTCCTAAATGTCTGACCGTATCTGAACGCCTCCAATGTTGTATCGTTGCTTTTAAAGTGATGAGAACCAATCTTGATGCCTTGAATGTTGATTTACAGGACTTCACTGTCCATCTTTACAATCTCTTACTTGAATACAGGCCTGGAAGAGATCAAGGAGAGGTGTTAGCAGAGGCTTTGAAGATAATGCTGTGCGATGATAGACAGCATGATATGCAAAAAGCTGCTGCATTTATAAAACGTCTGACTACATTGTCACTGTGTGTTGGATCTGCAGATTCCATGGCAGCCTTGGTCACTGTAAAGCACCTCCTTCTGAAAAATATCAAGTGCAGAAATTTGTTGGAAAATGACACTGGAGGGGGCTCTGTTTCTGGCACAATTCCGAAATATCTACCATATTCGACAGATCCTATTTTAAGCGGCGCCCTTGCCTCTGTACTTTGGGAACTGAGTCTTTTGTCCAAACACTACCATCCTGCCATATCAACGATGGCGACAGGCCTTTCAAGCATGAGCACTGAACAAAACCAAGTGTTCCTCTCCAAGTCTTCTCCTCAACTAGCTTTCAAGGACATGTCTATAGACCAAGAACTATCTTTTGAACAAAGTGGCAGTATAAAATTAAACAACAAGAAGAGACGGTCAAATGACAAGGCTACATCAGATACCATTGGTTCCACAACAGTAACGAGTTCATTCGATGAGGATGATTTGCAAAAGAAATTTAGTTCCCATTTTATGGTTCTTCATGAGATCAAGGAGAATGAAAGGTTGAGAAGTAAGTTGAATAAGACTGCACAATCACTTCAGCTATATGAAAAATACAAAAAACAAAAGAAGAAACGATCAAAACCAAGTAAATGA 2511 0.4166 MGKKQTQQKILLPPDLPPEIPDDEVEYSDDDIKFVKENRAFASLLSTLDTQSITKHVTRVADAKDDVLEKLYEQRMQKNALKKEKEETGLQVDRVDALPVKTLDGKIYFRTATKTAAVNGPSEVETGEDDNVVKSLFKLTKAEKRAKLKKIRKEGKKQDKEVAKEEVEEAPQAAALAEVEEDLKVEEAFESKKFRLAELGNALLTDPESNIKGLKDMVQLSKDNDRTIVKLGLLSLLAVFRDIIPGYRIRLPTEKELEMKVSKTIRKMRFYESTLLSAYKAYLQRLIALEKQPLFQLVAVRCICSLLESNPHFNYRETLLDATVRNINSSNDAIRQLCCSTIKSLFTNEGKHGGEATVEAVRLISYQVKDHNCQLHPDSIEVFLSLSFDEDLGKSEKTDRDQKYKNKKDKKRKHMEGSNQLSENDRKKSRQESISKTREEVEADYKAASFTLDATEKRQMQTQTLSAVFEMYFRILKHTMQSIVVRPEANLEVVSAAVGVEPHPLLDPCLKGLAKFAHLIDLDFLGDLMKHLKVLASGGRNLGNTSEKFPKCLTVSERLQCCIVAFKVMRTNLDALNVDLQDFTVHLYNLLLEYRPGRDQGEVLAEALKIMLCDDRQHDMQKAAAFIKRLTTLSLCVGSADSMAALVTVKHLLLKNIKCRNLLENDTGGGSVSGTIPKYLPYSTDPILSGALASVLWELSLLSKHYHPAISTMATGLSSMSTEQNQVFLSKSSPQLAFKDMSIDQELSFEQSGSIKLNNKKRRSNDKATSDTIGSTTVTSSFDEDDLQKKFSSHFMVLHEIKENERLRSKLNKTAQSLQLYEKYKKQKKKRSKPSK 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun8278g00004 836 Pfam Nucleolar complex-associated protein 192 282 IPR011501 -
Vifaun8278g00004 836 MobiDBLite consensus disorder prediction 1 22 - -
Vifaun8278g00004 836 Pfam CBF/Mak21 family 559 714 IPR005612 -
Vifaun8278g00004 836 Coils Coil 68 88 - -
Vifaun8278g00004 836 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 5 822 IPR016903 -
Vifaun8278g00004 836 MobiDBLite consensus disorder prediction 395 440 - -
Vifaun8278g00004 836 SUPERFAMILY ARM repeat 212 636 IPR016024 -
Vifaun8278g00004 836 MobiDBLite consensus disorder prediction 413 440 - -
Vifaun8278g00004 836 PIRSF Noc3 2 815 IPR016903 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun8278g00004 1 811 Core DNA Replication Machinery Family AT1G79150 57.213 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun8278g00004 K14834 - gmx:100776136 1237.63