Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun8213g00002 ATGGAGAGGTTAGAGTTGAAAGAGGTTCAGAAACTCGAAGGTCACACCGATAGGGTTTGGAGCTTGGATTGGAATCCGGCCACTGGTCATGCCGGTGTTCCGCTCGTTTTCGCTTCTTGCAGCGGCGATAAAACCGGTAACGAGCCAGTTGTAATAGCACGCGGAGGATTCACGGGTCTATTCCCAGAAGGAAGTAGAGAAGCAATCGGCATGTCGAAGGAGATAAGCATTTTTCTTTGTAATGTTCAGTTTACAAAAGATGCTGGTGCCTTTTGTGTGACAGGAGTTAAACTTGACAATGCAACAACTATAGCAACGTTTGATCCAAATGAGAAAACCTACAACATTAATGGAAAGGATGTGCAAGGACACTTCATGGTGGATTACACTGCTGCTCAGATTGACCACAATGTGTCGAATAAATATAGAGGAAAACATGACAGCAACATCATAGTTGCACAAAAGTACTACATATCTATCAGTGGCTATAATGTCAGTTCATTGGTTGATGGCATGTGCAACATAGCATGTGTTACAGTTGCCCTTAAAGAATGTTTGTTTCTTTCATATCAGAATATGCAGAATATTATTCTATTGTTTTCTATTGCTGTTCAGCATCTGATTGCAGAAGTCAGTGAAATTATGACTAATGATACTGTAGATAAGGCTGGTTTGTGGAAAAACAAACTCATTGATCAGTCATTGGAGCTTTTAGATTATTTACCTCAAGCAATTCAAGACATTTGCTTCTTGAAAGAGATCCACATGGAAATGTTCAAGTACCTAAAGTTGCATATCATTATATTTTGTGTTCATTTGTCTTCTTTATCCAATTTTGAATCAGTTGCAGACTGTGATACCAGAGATTTTACTGATCAAAAAAGGGAGGACATGTTGGTTTCCGATTTCGTTCGACTTTGCTTTAAATATGAAGGTTCTGCAGTTCAGTGCAGTAATCAAATTGGTGTGAGTAATGGTGACTCTGCATCTGTACCGTATTTGAAGGATTGGCATTTTGTGAAGGAGTATCCTGATTACGTACCATACATCACTCCGATGTTCTTTTGTGATGATTGGCTCAACTTGTATCTCGATAACTTTAGAATGAATACTTATTCCGACAGAGACCAGCAAAATAAGGAAATATGTTGCTCTGACTATCGTTTTGTTTACATGGGAGTAAAAGGATCTTGGACTCCTCTACATGCTGATGTTTTCAGGTCGTATAGCTGGTCAGCAAATGTCTGTGGAAAGAAGAGATGGTTTTTTCTAGATCCTTCCCAGTGCCATCTTGTGTTTGACAGGAACATGAAAAGCTGTGTATATAATATCTTTGATGAAGTATCTGACTCAAAGTATCCTAGTTTTAAAAAGGCTATCTGGTTAGAATGCACACAAGAAGCAGGTGAAATCATATTTGTTCCTAGCGGATGGTTGGATTTGGGAAATGGGAAAACTCTTGATCTTGAACGGTGTTCCCGATCGAAGCTTCGAAAACAATGCATAAAGTATCTTGGACCTCAAGAGAGGGAGAACTATGAATATGTTGTCTGCGATGGAAAAATTATCAACAACCAATCTGGAGATTTTCTTCATACCAAAAAGGATTCTGAAGATGCTAAGTGGATATTTGTAATGAGCACCGAGAAGAAACTTTATGCTGGAAAGAAAAAGAAGGGGTTGTTCCATCATTCTTCTTTTTTGGCTGGTGGAGCTACCTTGGCTGCTGGACGGCTCGAAGCCGAGGATGGGGTTCTGAAGTCCATCTCTGCATATAGTGGACACTATCGGCCAACAGACGAAACACTCGACGCGTTCTTATCATATCTCAGGGAAAATGGTGTCAATCTTGTTACCTTTCATGAATTTTGTGTAGGTATGCGTAGCTTGGACCAAATGGTAGTCAAGGAAGGATCATGGTCCTAG 1926 0.3993 MERLELKEVQKLEGHTDRVWSLDWNPATGHAGVPLVFASCSGDKTGNEPVVIARGGFTGLFPEGSREAIGMSKEISIFLCNVQFTKDAGAFCVTGVKLDNATTIATFDPNEKTYNINGKDVQGHFMVDYTAAQIDHNVSNKYRGKHDSNIIVAQKYYISISGYNVSSLVDGMCNIACVTVALKECLFLSYQNMQNIILLFSIAVQHLIAEVSEIMTNDTVDKAGLWKNKLIDQSLELLDYLPQAIQDICFLKEIHMEMFKYLKLHIIIFCVHLSSLSNFESVADCDTRDFTDQKREDMLVSDFVRLCFKYEGSAVQCSNQIGVSNGDSASVPYLKDWHFVKEYPDYVPYITPMFFCDDWLNLYLDNFRMNTYSDRDQQNKEICCSDYRFVYMGVKGSWTPLHADVFRSYSWSANVCGKKRWFFLDPSQCHLVFDRNMKSCVYNIFDEVSDSKYPSFKKAIWLECTQEAGEIIFVPSGWLDLGNGKTLDLERCSRSKLRKQCIKYLGPQERENYEYVVCDGKIINNQSGDFLHTKKDSEDAKWIFVMSTEKKLYAGKKKKGLFHHSSFLAGGATLAAGRLEAEDGVLKSISAYSGHYRPTDETLDAFLSYLRENGVNLVTFHEFCVGMRSLDQMVVKEGSWS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun8213g00002 641 SUPERFAMILY PLC-like phosphodiesterases 48 134 IPR017946 GO:0006629|GO:0008081
Vifaun8213g00002 641 SMART WD40_4 5 54 IPR001680 GO:0005515
Vifaun8213g00002 641 Pfam Cupin-like domain 379 479 IPR041667 -
Vifaun8213g00002 641 ProSiteProfiles JmjC domain profile. 357 508 IPR003347 -
Vifaun8213g00002 641 SUPERFAMILY Clavaminate synthase-like 282 478 - -
Vifaun8213g00002 641 Gene3D Cupin 261 479 - -
Vifaun8213g00002 641 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 478 619 IPR044159 -
Vifaun8213g00002 641 SMART cupin_9 332 492 IPR003347 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun8213g00002 46 139 Receptor kinase-like Gene Family AT5G58050 48.485 5.51e-21 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Vifaun8213g00002 Cupin_8 9.8e-11 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun8213g00002 - - lja:Lj1g3v0342020.1 365.155