Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun8213g00001 ATGGCGAAATCACACGAAACCGAACTTCCAGTCAAAGCTTTTGGTTGGGCTGCTACTGATACTTCTGGCATACTCTCTCCATTCCATTTCTCTAGAAGGGAAAATGGCGAAGATGATGTAGCGATCAAGATTCTCTTTTGTGGTGTTTGTCATTCTGATCTACACACTCTCAAGAACGATTGGGGTTTCACTACTTACCCTGTTGTTCCCGGGCATGAGATTGTTGGCGTTGTGACAAAAGTTGGAAGCAATGTGAAAATTTTCCGTGAGGGGGATAAAGTTGGTGTTGGTGTAATGGTGGAGTCTTGTCAAACTTGTGAGAATTGCCAGCAGGATCTAGAGAATTACTGTCCTAAAATTGTGTTCACCTATAACTCTGGTTATAAAGGGACAAGAACCCAGGGGGGTTATTCTGATTCTGTGGTTGTTCACCAAAAGTATGTACTCCAGTTTCCTGACAACTTACCCCTTGATGCCGGTGCTCCGTTATTGTGTGCTGGGATTACCGTGTATAGCCCCATGATATATTATGGCATGACTGAGCCAGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGTCATGTTGCAATCAAATTTGGCAAAGCATTTGGGCTGAAGGTTACTGTCATTAGTACCTCTCCTGACAAGGAAAGAGAGGCCATTCACAAACTTGGTGCTGATGCTTTCCTTGTTTCCACTGATTCTGAAAAACTGAAGGCTGCTACCGGAACTATGGATTATATCATTGACACAATTTCTGCTGTTCATCCCCTGTTGCCACTGCTTGGCCTGTTGAAGCTGAATGGGAAATTGGTCACTGTGGGGTTGCCTAGCAAGCCCCTTGAGCTCTCAGTCTTCCCATTAGTTGGAGGACGGAAGCTTGTAGGAGGAAGCAACTTCGGAGGGATCAAGGAGACTCAGGAGATGCTGGATTTCTGCGCCAAGCACAACATAACTGCTGATATTGAGTTGATTAGGATGGACCAAATCAACACTGCAATGGAAAGGCTTAGCAAAGCTGATGTCAAATATCGATTTGTGATTGATGTGGCCAAATCTTTTTCAAGTTTGTAG 1080 0.4481 MAKSHETELPVKAFGWAATDTSGILSPFHFSRRENGEDDVAIKILFCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGSNVKIFREGDKVGVGVMVESCQTCENCQQDLENYCPKIVFTYNSGYKGTRTQGGYSDSVVVHQKYVLQFPDNLPLDAGAPLLCAGITVYSPMIYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPDKEREAIHKLGADAFLVSTDSEKLKAATGTMDYIIDTISAVHPLLPLLGLLKLNGKLVTVGLPSKPLELSVFPLVGGRKLVGGSNFGGIKETQEMLDFCAKHNITADIELIRMDQINTAMERLSKADVKYRFVIDVAKSFSSL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun8213g00001 359 Pfam Zinc-binding dehydrogenase 193 316 IPR013149 -
Vifaun8213g00001 359 FunFam probable cinnamyl alcohol dehydrogenase 16 179 - -
Vifaun8213g00001 359 SUPERFAMILY GroES-like 20 184 IPR011032 -
Vifaun8213g00001 359 FunFam Putative cinnamyl alcohol dehydrogenase 6 323 352 - -
Vifaun8213g00001 359 Gene3D - 16 352 - -
Vifaun8213g00001 359 FunFam Cinnamyl alcohol dehydrogenase 166 322 - -
Vifaun8213g00001 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 320 IPR036291 -
Vifaun8213g00001 359 Gene3D - 166 322 - -
Vifaun8213g00001 359 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Vifaun8213g00001 359 CDD CAD1 14 351 IPR047109 GO:0016616
Vifaun8213g00001 359 PANTHER ALDEHYDE REDUCTASE 5 355 IPR047109 GO:0016616
Vifaun8213g00001 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Vifaun8213g00001 359 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun8213g00001 12 356 Monolignol Biosynthesis Gene Families AT2G21730 72.414 0.0 519