Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7995g00003 ATGGAAACTCACTTCAATCATAGTCTCTTCGAGAGACGCCCCTTCCTCAAATCCAAGGCTCCTGCAGTTAAATGGGTCAAACAATGGGTTCCCCAAGATGTTGTTGCAACTGGTGGGAAGTGCATGCTGTTAAAATGGGTAACAGAGGATGCCGTAAAGGCCTTGAAAGAAAAGGAAAATGAACCTTTAGCACCTGAGCCAGAACCCGAGCCAACGACTGAAGTACTTTTTCTTTGCAGCTACGAAGGCTGTGGAAAGACATTTATAGATGCGGGTGCTTTGAGAAAGCATTCTCACATCCACGGAGAGAGGCAATTTGTTTGCCATTACGAAGGGTGTGGAAAGAAATTTCTGGACAGCTCAAAGTTAAAAAGACATTTCCTTATTCATACAGGGGAGAGGGATTTTGTGTGTCCTCATGAAGGCTGTGGTAAGGCCTTCTCCTTGGATTTTAACCTGAGGTCTCACATGAAGACACATTCACAAGAGAACTATCATATATGCCCATACCCTGATTGTGGGAAGAGATACGCTCATGAATACAAGCTAAAGAATCACATTACTTCTCATCATGAAAAGGGTACACCAACACCAACACCAATGGAGGTGACAAAGTATGCTACTCCACAATCAGAAAAGCAAACAAAAACAACTAAACCTTCTGGGGCAGCATACGGCTCGGCATCCTCTGATCGCCCATATGCATGTCCTTATGATGGGTGTGAAAAAGCCTACATACATGTTTACAAGCTTAGACTGCATTTCAGGAGGGCGCATCCCGGCCACATTGATGAAAATACCGAAAATGCCAACAATGAAATGGATGAAGCAAGTGATCAAGATGCATATGGTGGAAAACAGTCCAATGGTAAAAGTCAGAAGCAGAGTAGGCCCAAGCCAAACGTGAAAGCACCTCCTTCCAAAGTTCCCCAACGAAAAGGGTCTAATCCAACTCCTCCCACTTTAAACATGGTTAAAAAACCTTGGCCGGTGAAAGAAGAAACTTACGATGAGGACAGCGAAGAAACCGAGGAGGATCGTGACAATGTTGAAGATGGTTGGAGATATGCTGGAAACAACGAAGATGATGATGAGGAAACAGAATATGAAGACTGA 1116 0.44 METHFNHSLFERRPFLKSKAPAVKWVKQWVPQDVVATGGKCMLLKWVTEDAVKALKEKENEPLAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHITSHHEKGTPTPTPMEVTKYATPQSEKQTKTTKPSGAAYGSASSDRPYACPYDGCEKAYIHVYKLRLHFRRAHPGHIDENTENANNEMDEASDQDAYGGKQSNGKSQKQSRPKPNVKAPPSKVPQRKGSNPTPPTLNMVKKPWPVKEETYDEDSEETEEDRDNVEDGWRYAGNNEDDDEETEYED 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7995g00003 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 234 264 IPR013087 -
Vifaun7995g00003 371 MobiDBLite consensus disorder prediction 187 231 - -
Vifaun7995g00003 371 Gene3D Classic Zinc Finger 207 279 - -
Vifaun7995g00003 371 FunFam Putative zinc finger protein 143 103 133 - -
Vifaun7995g00003 371 ProSitePatterns Zinc finger C2H2 type domain signature. 108 130 IPR013087 -
Vifaun7995g00003 371 FunFam zinc finger transcription factor YY1 77 102 - -
Vifaun7995g00003 371 SUPERFAMILY beta-beta-alpha zinc fingers 117 169 IPR036236 -
Vifaun7995g00003 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 196 IPR013087 -
Vifaun7995g00003 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 106 IPR013087 -
Vifaun7995g00003 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 165 IPR013087 -
Vifaun7995g00003 371 Gene3D Classic Zinc Finger 103 133 - -
Vifaun7995g00003 371 Pfam Zinc finger, C2H2 type 136 160 IPR013087 -
Vifaun7995g00003 371 SUPERFAMILY beta-beta-alpha zinc fingers 229 257 IPR036236 -
Vifaun7995g00003 371 FunFam zinc finger transcription factor YY1 163 194 - -
Vifaun7995g00003 371 Gene3D Classic Zinc Finger 77 102 - -
Vifaun7995g00003 371 Gene3D Classic Zinc Finger 134 161 - -
Vifaun7995g00003 371 Gene3D Classic Zinc Finger 162 191 - -
Vifaun7995g00003 371 FunFam Zinc finger transcription factor YY1 209 275 - -
Vifaun7995g00003 371 SMART c2h2final6 136 160 IPR013087 -
Vifaun7995g00003 371 SMART c2h2final6 234 259 IPR013087 -
Vifaun7995g00003 371 SMART c2h2final6 166 190 IPR013087 -
Vifaun7995g00003 371 SMART c2h2final6 77 101 IPR013087 -
Vifaun7995g00003 371 SMART c2h2final6 106 130 IPR013087 -
Vifaun7995g00003 371 MobiDBLite consensus disorder prediction 275 371 - -
Vifaun7995g00003 371 SUPERFAMILY beta-beta-alpha zinc fingers 80 130 IPR036236 -
Vifaun7995g00003 371 MobiDBLite consensus disorder prediction 201 225 - -
Vifaun7995g00003 371 FunFam Zinc finger protein 410 134 161 - -
Vifaun7995g00003 371 ProSitePatterns Zinc finger C2H2 type domain signature. 138 160 IPR013087 -
Vifaun7995g00003 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 135 IPR013087 -
Vifaun7995g00003 371 ProSitePatterns Zinc finger C2H2 type domain signature. 168 191 IPR013087 -
Vifaun7995g00003 371 MobiDBLite consensus disorder prediction 282 300 - -
Vifaun7995g00003 371 ProSitePatterns Zinc finger C2H2 type domain signature. 236 259 IPR013087 -
Vifaun7995g00003 371 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 18 348 - -
Vifaun7995g00003 371 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7995g00003 10 357 C2H2 Transcription Factor Family AT4G06634 63.342 1.54e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vifaun7995g00003 zf-C2H2 0.00037 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun7995g00003 - - zju:107412546 607.831