Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7795g00001 ATGGGAAGAGCTCCTTGCTGTGACAAAGCTAGTGTAAAGAAAGGTCCATGGTCTCCTGAAGAAGATGCAAAACTAAAAGACTACATAGAGAAAAATGGAACTGGTGGAAACTGGATTTCTTTGCCAAAAAAAGCTGATTTGACAAGGTGTGGCAAAAGCTGTAGACTAAGATGGCTTAATTATCTTAGACCAAATATTAAGCATGGTGATTTTTCTGACTCAGAAGATAACATAATTTGCACCCTCTTTTCTAGCATTGGAAGCAGGTGGTCAATAATAGCATCTAAGCTACAAGGAAGAACTGACAATGATGTGAAGAACTATTGGAACACAAAACTCAAGAAAAAATATATGTCCATGAACCAATCATTGGAGATGAGATCTCAACAAGTTACCCTTTTATCCATCCTTCAAAATTCAACAACATCATCTCCATCATTATCATTCACAGGTTCCTTTTCCTACTCTTCAGCGGCATCTTCAAGTCTTCTTAGTGGAAATTCTTTTACTTCACCACAAGAAAGGTTCATTAGTCCCTCTCAGAGCAATAGCAAAAACCAGATCAACCTTGTAATAGATCAAGAGCTTGTTGAAAAGTATGATTATGATGATGATGATGATGATGATGATGTTGATTATCTCTATAATGGTGGTAGTGTTAATCAGTGGACAGAGAAAGAAAATGGATTATGGGGAGAAAATCCATTTGATGAAATTAAAGAGCTTATAAGCACTAATAATACTAGAAGTTGCAACAACTTTTTGTTTGATGAGTAA 777 0.3578 MGRAPCCDKASVKKGPWSPEEDAKLKDYIEKNGTGGNWISLPKKADLTRCGKSCRLRWLNYLRPNIKHGDFSDSEDNIICTLFSSIGSRWSIIASKLQGRTDNDVKNYWNTKLKKKYMSMNQSLEMRSQQVTLLSILQNSTTSSPSLSFTGSFSYSSAASSSLLSGNSFTSPQERFISPSQSNSKNQINLVIDQELVEKYDYDDDDDDDDVDYLYNGGSVNQWTEKENGLWGENPFDEIKELISTNNTRSCNNFLFDE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7795g00001 258 Gene3D - 70 133 - -
Vifaun7795g00001 258 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Vifaun7795g00001 258 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Vifaun7795g00001 258 CDD SANT 71 113 IPR001005 -
Vifaun7795g00001 258 Gene3D - 7 68 - -
Vifaun7795g00001 258 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Vifaun7795g00001 258 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Vifaun7795g00001 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Vifaun7795g00001 258 CDD SANT 16 62 IPR001005 -
Vifaun7795g00001 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Vifaun7795g00001 258 PANTHER OS09G0431300 PROTEIN 1 189 - -
Vifaun7795g00001 258 FunFam Transcription factor RAX3 7 68 - -
Vifaun7795g00001 258 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Vifaun7795g00001 258 SMART sant 67 115 IPR001005 -
Vifaun7795g00001 258 SMART sant 13 64 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7795g00001 1 119 MYB Transcription Factor Family AT2G36890 82.353 8.27e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vifaun7795g00001 Myb_DNA-binding 4.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun7795g00001 K09422 - gmx:778084 290.812