Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7715g00001 ATGCAGCTGCTCAGTGGCTTGAATAAGCGTTATGTGATACTCATCAAAAAAGGTGTCTACATGGAGAATGTGGTGGTTGACAAGGAGAACCTTGCTATGGCCGGAGAGGGTACGGGTGCCACCATTATCTCCAGTAACCTTAATACCTGTATCAATAATTTAAGTACCTACCACACTGCAAGTTTTGGTGCGAAAGCTTATGGATTCATGGCACGTGATATTTCATTCTTTAACACTGTTGGGCCTTTAGGTGAACAAGCTGTAGCCCTAAGATCAACTTCGGACTGTTTGATATTTTGCCGTTGTGAGATTTCCGGATTTCAGGATAGTTTGTATGCGCATTCAAAACGTCAATTCTACCGTGAATGCGAAATCCATGGTACTATCGATTTTATTTTTGGATATGGCACAACTGTGTTTCAAAACTAA 429 0.4126 MQLLSGLNKRYVILIKKGVYMENVVVDKENLAMAGEGTGATIISSNLNTCINNLSTYHTASFGAKAYGFMARDISFFNTVGPLGEQAVALRSTSDCLIFCRCEISGFQDSLYAHSKRQFYRECEIHGTIDFIFGYGTTVFQN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7715g00001 142 SUPERFAMILY Pectin lyase-like 6 142 IPR011050 -
Vifaun7715g00001 142 PANTHER PECTINESTERASE 10 142 - -
Vifaun7715g00001 142 Pfam Pectinesterase 8 142 IPR000070 GO:0030599|GO:0042545
Vifaun7715g00001 142 ProSitePatterns Pectinesterase signature 2. 125 134 IPR033131 -
Vifaun7715g00001 142 Gene3D - 4 142 IPR012334 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7715g00001 10 142 Carbohydrate Esterase AT4G33220 54.815 3.79e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun7715g00001 K01051 - gmx:100798620 155.606