Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7697g00001 ATGATGAAAAATTGCTGGGCAAATCTATGGCTTATGAACAAGAAACAAAAACCAAAGCAAAAACCGAGACTGGTGGTGCTACAAAGGCCCACGGAAGAAAGGATTAAGTCTAGATACGAGTTAGGGAAGAGACTAGATATAGGAGAAATCGGAACTACTTATTTGTGCAAAGACAGAAATACGGGAGAGAAAGTTGCGTGCAAGTCGATTTCCAAGAATGGACTTAAAACAGCGATTGATATTGAAATGGTCAGAAGAGAGGTTGCTATCTTGAGTCATTTGCCTAAACACCCTAACATCGTTACGTTGAAGGATACGTTTGAAGACTACGATCACGTTCATCTTGTTATGGAACACTGTGAAGGTGGTGTGCTTTTTGATCGAATCGTTGCTAGAGGACATTTCACCGAACTCAGAGCTGCTTCCATCGTTAATACCATCGTCCAAGTTGTTCAGATGTGCCACAAACATGGTGTGATGCATAGGAATCTCAAACCTGAAAACATTTTGTTTGCAAATAACATGGAAACAGCGCCCTTAAAAGTTACTGACTTTGCTTTGTCAATATTCTTTAAACCAGGTGAAAGATTTCATGAGATAACTGGAAGTCCATATTACATGGCCCCTGAAGTGTTAATGAAAAATTATGGTCCTGAAGTTGATATATGGAGTGTTGGAGTAATTCTTTACATCTTACTTTGTGGTGTCCCTCCGTTTTGGGCAGAAACTGAGCAGGGAGTTTCTCAAGCAATTATACGGTCGGTTATTGACTTTAAAAGAGATCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTTAAGAAGATGCTTGATCCTGATTCTAAGCGCCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGTTTCTGAATGGTAAGACAGCTTCTAATGTTTCTTTACGAGAAACCGTCAATGTACGGCTCATGCAATATTTTGCAATGAACAAACTTAAGAAAACAGCATTGAGGGTGATTGCAGATCATTTGTCTGTAGAAGAAGTTGCTGGAATTAAAGAGGGATTCGATGTGATGGACACAGAAAATAATGGGAAAATTAACATTGACGAACTTCGAGTAGGGTTGATTAAGCTAGGCCACCAAATTCCTGATGCAGATGTCCAAATACTTATGGAAGCTGGTGATGTAGACAAAGATGGGTACCTAGATTATGGGGAGTTTGTAGCCATTTCTATTCATCTGAGAAAGATATCCCATGATGAACACCTACACAGAGCATTCCAATTTTTCGACAAAAATGAATCTGGGTATATTGAACTTGAGGAGTTAAGTAAGGCTTTAGGTGACGAGATTGACAAAAACAGTGAAGAAGTCATTAATGCAATTATGCATGATGTGGACACAGACAAGGATGGAAAAATAAGTTATGAGGAATTTGCTGCAATGATGAAGGCTGGAACTGATTGGAGAAAAGCATCAAGGCAGTATTCGCGAGAGAGGTTTAACAGTCTTAGTCTAAAACTGATGAAGGAGGGGTCAGTAAAAATTGAGCAATGA 1539 0.3951 MMKNCWANLWLMNKKQKPKQKPRLVVLQRPTEERIKSRYELGKRLDIGEIGTTYLCKDRNTGEKVACKSISKNGLKTAIDIEMVRREVAILSHLPKHPNIVTLKDTFEDYDHVHLVMEHCEGGVLFDRIVARGHFTELRAASIVNTIVQVVQMCHKHGVMHRNLKPENILFANNMETAPLKVTDFALSIFFKPGERFHEITGSPYYMAPEVLMKNYGPEVDIWSVGVILYILLCGVPPFWAETEQGVSQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPDSKRRLTAQEVLDHPWFLNGKTASNVSLRETVNVRLMQYFAMNKLKKTALRVIADHLSVEEVAGIKEGFDVMDTENNGKINIDELRVGLIKLGHQIPDADVQILMEAGDVDKDGYLDYGEFVAISIHLRKISHDEHLHRAFQFFDKNESGYIELEELSKALGDEIDKNSEEVINAIMHDVDTDKDGKISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMKEGSVKIEQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7697g00001 512 FunFam Aurora kinase A 31 123 - -
Vifaun7697g00001 512 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Vifaun7697g00001 512 SUPERFAMILY EF-hand 322 490 IPR011992 -
Vifaun7697g00001 512 FunFam Calcium-dependent protein kinase 7 306 481 - -
Vifaun7697g00001 512 Gene3D Phosphorylase Kinase; domain 1 14 120 - -
Vifaun7697g00001 512 Pfam EF hand 346 366 IPR002048 GO:0005509
Vifaun7697g00001 512 ProSiteProfiles EF-hand calcium-binding domain profile. 340 375 IPR002048 GO:0005509
Vifaun7697g00001 512 ProSitePatterns EF-hand calcium-binding domain. 389 401 IPR018247 -
Vifaun7697g00001 512 ProSiteProfiles Protein kinase domain profile. 39 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun7697g00001 512 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 473 - -
Vifaun7697g00001 512 SMART efh_1 452 480 IPR002048 GO:0005509
Vifaun7697g00001 512 SMART efh_1 380 408 IPR002048 GO:0005509
Vifaun7697g00001 512 SMART efh_1 416 444 IPR002048 GO:0005509
Vifaun7697g00001 512 SMART efh_1 344 372 IPR002048 GO:0005509
Vifaun7697g00001 512 ProSiteProfiles EF-hand calcium-binding domain profile. 376 411 IPR002048 GO:0005509
Vifaun7697g00001 512 CDD EFh 416 478 IPR002048 GO:0005509
Vifaun7697g00001 512 FunFam calcium-dependent protein kinase 13 125 305 - -
Vifaun7697g00001 512 SUPERFAMILY Protein kinase-like (PK-like) 36 309 IPR011009 -
Vifaun7697g00001 512 Pfam EF-hand domain pair 415 478 IPR002048 GO:0005509
Vifaun7697g00001 512 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Vifaun7697g00001 512 ProSiteProfiles EF-hand calcium-binding domain profile. 412 447 IPR002048 GO:0005509
Vifaun7697g00001 512 ProSitePatterns EF-hand calcium-binding domain. 425 437 IPR018247 -
Vifaun7697g00001 512 Gene3D Transferase(Phosphotransferase) domain 1 121 305 - -
Vifaun7697g00001 512 Pfam Protein kinase domain 39 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun7697g00001 512 Pfam EF-hand domain pair 371 403 IPR002048 GO:0005509
Vifaun7697g00001 512 CDD STKc_CAMK 38 296 - -
Vifaun7697g00001 512 Gene3D - 306 480 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7697g00001 2 511 EF-hand Containing Proteins AT5G19450 68.491 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vifaun7697g00001 Pkinase 9.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun7697g00001 K13412 - gmx:100815320 776.933