Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7556g00002 ATGCTAACTGGATTAATGGACAATCATTGGAAGGCTTGCACTGATTGGGTTAACCCTAATGGAAAACCTAATCTCCAATTTTTCTCCACTCATTTTGGTTCCTCCAAAGTTCAGGTTGATAAATTGTTACTTCTAATTACACTCAAACTTTGTAAGATTGAGATTCCTTTAACTCGTTTGCACCATAATTGTGAAATGGTTCTTTGCGAAGATGGGACTGAAGCATTAGTCGAAGTTTGTATTGTAGATCACAATTTAGAGGTCAAATTACACGAACTTGTTAAACCGGAGAAAGCAATCAAAGATTACAGAACAGAGATTACTGGTGTCTCTTCTAAAGATCTAGAGACCGTGACTCGCTCCTTAGCTGATATACAAAAATTGATGAAGAAGTGGTTATCCAGTGGAGCCATATTAGTGGGACACAGTTTGTATAATGATCTACGCGTGCTGAAGCTATATTATGATAGAGTGGTCGACACTGCATACATCTTCCAACCCATGGATGGAGCTACTCACAGGAGACCTTCTTTAAATAGTTTGTGTCAGGCAAGTAACAACTTATTTAAATGCAATGCAAGGACTATGATTTTGTATTAA 600 0.375 MLTGLMDNHWKACTDWVNPNGKPNLQFFSTHFGSSKVQVDKLLLLITLKLCKIEIPLTRLHHNCEMVLCEDGTEALVEVCIVDHNLEVKLHELVKPEKAIKDYRTEITGVSSKDLETVTRSLADIQKLMKKWLSSGAILVGHSLYNDLRVLKLYYDRVVDTAYIFQPMDGATHRRPSLNSLCQASNNLFKCNARTMILY 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7556g00002 199 SUPERFAMILY Ribonuclease H-like 62 185 IPR012337 -
Vifaun7556g00002 199 SMART exoiiiendus 58 198 IPR013520 -
Vifaun7556g00002 199 Gene3D - 62 192 IPR036397 GO:0003676
Vifaun7556g00002 199 Pfam Exonuclease 64 163 IPR013520 -
Vifaun7556g00002 199 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 64 183 IPR047021 GO:0004527
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7556g00002 63 184 C2H2 Transcription Factor Family AT5G40310 33.094 8.75e-09 52.4