Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7546g00001 ATGGCGCTAGCAGCACTCTCTCTATGCCATTGCTCTTCTTCTATAACAACCTTTCTTCCTTCAAATTCCCGTCAACCCTCAACCTTTTCCCCTCATCTTCAAACTCAACCCTTCATCTCCCCACTCACCAAATCACAACCACCAAACAGCAGCTCTTTCCTTTTCCAATTTCGTCCCTCCATCCACTGCCGCTGCACTTCCAACAAGTCCAATGTCGGCTTCCAATTCGTGTCACTCGTCTCTTTGTTTCAAGAAATCGGTATCAGCTTTAAGGAAACCAAATCGCTCTTGAGCAATGCTTCCGAACTTAGCTCGATACAACTAGATTCATTGCATGGTCGCATTCTTTATTTACAGTCTCTCGGCTTTTTGAAAAATGAATTGCAAGGACAGCTTAAGCAAGCTACGGTGAAACTTCTTTTATCAAAAAAGTTATCCGATTTTCCTCACAAGGTTCAATTGCTTCTTGACCGTGGAATTGCGGTTGACAAGATTGAACATGTGCTTAACAAAGTGGATTTGTCAAAGGCAATTTGTCATAGGTCGATGGAAGAAATTGAAAGAGTAATTAGTTTCTTAAAACCCTTTGGTGGTGTTGATTTGATTGTGAAGCACCCTGCAATTCTCAACCATGATTTTGATTGTAAGCTGAAACCGAGAATCAGGGTTTTTACTGAGTTAAGTGGCGGGGACGAGGATAGTGTTGGGAAAGTGCTGAATAAGTTTCCTGTTATCTTGAATCTTAGGGTGGAACATGTTGAGACACATATAGAGTTCTTGAGGTCTTTTGCAGAACTTGATGATCAACAAATATTTAAGATAGTGTTGGTGTTTCCAGCAATCTTGAGTTGTAGTAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGATTGTGGGTTAGATTCGGGCGAAATCTTTAAGTTCTTGATCAATGCACCGGTGTTTTTGGCCATTTCGTTCCGCGACAACCTTGCGAATAGGCTTGTGTTTTTGGTCAAGATTGGGTATGAATATAGGACAAAAGAGTTGCCAGTGGCGATCGCGATTAGTTCTAGAATGAGCTGTAAGAATATGCAGAAGACGGTGAGTGTATTATTGAATTACGGGTTCTCACCCGAAGAAACTTTTGCTATGACTACAAAGAAACCACGGATACTGCAGTATAATCACGCCTCTCTAGAGAAGAAGATGAAGTATTTGACAGAGGAGATGAATCGTGACATTAAGGAGTTGCTGAATTTTCCTGCATTTCTTGGATACAATTTAGATGAAAGAATTAAGCATAGGTATGAAATAAAGAAGGGTTCAAGGGAGGGACAAATGTCTCTCAGTCAGCTTTTATATGTTTCAACTGAGAAAATTCCAAAAAAGGCTTCTGAAAAATCCAAATTGAAATAA 1404 0.4024 MALAALSLCHCSSSITTFLPSNSRQPSTFSPHLQTQPFISPLTKSQPPNSSSFLFQFRPSIHCRCTSNKSNVGFQFVSLVSLFQEIGISFKETKSLLSNASELSSIQLDSLHGRILYLQSLGFLKNELQGQLKQATVKLLLSKKLSDFPHKVQLLLDRGIAVDKIEHVLNKVDLSKAICHRSMEEIERVISFLKPFGGVDLIVKHPAILNHDFDCKLKPRIRVFTELSGGDEDSVGKVLNKFPVILNLRVEHVETHIEFLRSFAELDDQQIFKIVLVFPAILSCSRERKLRPRIQFLKDCGLDSGEIFKFLINAPVFLAISFRDNLANRLVFLVKIGYEYRTKELPVAIAISSRMSCKNMQKTVSVLLNYGFSPEETFAMTTKKPRILQYNHASLEKKMKYLTEEMNRDIKELLNFPAFLGYNLDERIKHRYEIKKGSREGQMSLSQLLYVSTEKIPKKASEKSKLK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7546g00001 467 SMART mt_12 308 339 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 SMART mt_12 94 124 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 SMART mt_12 236 267 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 SMART mt_12 378 409 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 SMART mt_12 199 230 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 SMART mt_12 410 442 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 Pfam mTERF 352 454 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 Pfam mTERF 81 335 IPR003690 GO:0003690|GO:0006355
Vifaun7546g00001 467 Gene3D Transcription termination factor 3, mitochondrial 252 464 IPR038538 -
Vifaun7546g00001 467 PANTHER CGI-12 PROTEIN-RELATED 75 228 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifaun7546g00001 mTERF 4.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun7546g00001 - - gmx:100799904 471.085