Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7482g00001 ATGGAAGGTTTACTCAAGGATTTCGAATTGGAAGACAAGGATCGTTCAATCGAAGCTCTCACTCGATGGAGATCCGCCGTCGCCTTGGTCAAAAACCCTCGCCGGAGGTTTCGCAACGTAGCTGATCTCGCTAAACGCGCTGTAGCGCAGGAGAAGCAGAGGAAAATTCAGGGAAAGTTTCGGGCTGTTATCAATGTTCAACGAGCAGCACTGCATTTTACCGATGCTATTGCTTCACCTGAATTCGAGGTATCAGAAAAGACGAGAGAAGCTGGTTTTGGAATCGAACCAGATGATATTGCATCAGTTGTTCGAAGCCATGATTACAAGAACTTTACAAAAGTTGGTGAAGTTCATGGGATTACAAGTAAACTTTCAGTCTCAGTTGATGAAGGTGTCCGTCAAGACAGTATACATATTTCCATTGGCATAGGGCTTCCCACTGAAGGGTGGCCAAAGGGTGTTTATGATGGTCTTGGAATCTTACTTAGTATATTCTTGGTAGTTTCTGTTACTGCTATCAGTGACTACCAGCAATCTCTACAGTTCAGAGATTTGGATAAAGAAAAGAAAAAGATAGATGTTCATGTTACCAGGGATGGTAAAAGACAGAAGATCTCAATTTATGACTTGGTAGTAGGAGATATAGTTCATTTGTCAACCGGTGATCAAGTTCCAGCTGATGGGGTTTTTATACATGGATATTCATTGTTAATTGACGAATCAAGTTTGTCAGGTGAGAGCGAACCTGTAAATATAGACGGTCGAAGACCTTTCCTTCTTTCGGGAACCAAAGTGCAAGACGGTCAGGGGAAAATGATAGTTACAACTGTTGGCATGAGGACTGAATGGGGAAAGTTGATGGAAACTTTGAGTGAGGGAGGAGAGGACGAGACTCCTTTACAGGTGAAGTTGAATGGAGTTGCTACAGTTATTGGTAAAATTGGTTTGACTTTTGCTGTGCTGACATTTTTGGTGTTGACAGTAAGATTTGTGATTGAAAAAGCAGTTCATGGAGACTTTAGCAGTTGGTCTTCAGAGGATGCACTGAAGCTACTGGACTACTTTGCTATTGCTGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTACCATTAGCTGTAACACTCAGTCTTGCTTTTGCAATGAAAAAATTGATGAACGATAGGGCACTTGTGAGACATCTTTCTGCGTGTGAGACTATGGGTTCAGCTAGTTGCATTTGCACCGATAAAACAGGAACGTTGACGACCAACCATATGGTGGTTGATAAAATTTGGATATGCGAAAAGACCACACAGATTAAAGGTGATGAGAGTACTGATAAATTGAAATCAGAGATATCTGATGAAGTTCTAAGCATCCTTTTGCAGGCTATATTTCAGAATACGTCATCGGAAGTTGTTAAAGACAAAGAAGGAAAGTGGACAATATTGGGAACACCAACAGAATCAGCAATATTGGAATTTGGCTTGGTTTCAGGCGGTGATTTTGATGCACAGCGTAAATCCTGTAAGATACTTAAGGTTGAGCCTTTCAATTCCGACAGGAAGCGGATGTCTGTGCTCGTAGGTCTTCCTGATGGAAGGGTCCGAGCTTTCTGCAAAGGTGCATCCGAAATAGTGTTGAAAATGTGTGATAAAATCATTGATAGTAATGGAACAACAGTTGATCTTCCTCAAGAGAAAGCAAAGATTGTGAATGACATTATAGATGGATTTGCCCATGAAGCTTTGAGAACTCTTTGTTTGGCTGTCAAAGATATAGATGAAACACAAGGTGAAACCATCATCCCTGAAAATGGATATACTTTGATAGCCATTGTAGGAATCAAGGATCCTGTGCGCTCTGGAGTTAAGGAAGCTGTTCAAAAATGTTTAGCAGCTGGAATATCTGTCCGCATGGTCACTGGTGATAACATAAATACAGCTAAGGCTATAGCTAGAGAATGTGGTATACTTACTGAGGGTGGTATAGCCATAGAAGGACCAGAATTTCGCAATTTGTCTCCGGAACAAATGAAGGATATCATACCAAGAATTCAGGTAATGGCACGATCCTTACCTCTTGACAAGCATACCTTGGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGTACCAACGATGCTCCTGCACTGCACGAGTCAGACATTGGGCTTGCCATGGGCATTGCAGGAACTGAGGTTGCAAAAGAAAATGCTGATGTGATTATAATGGATGACAACTTCACTACCATTGTCAAAGTGGCTAAATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTTAATGTTGTTGCTCTGATTACTAACTTCGTTTCTGCATGCATCACTGGAGCTGCTCCACTAACGGCTGTTCAGTTGCTCTGGGTTAACTTGATTATGGACACTCTTGGTGCATTGGCCTTGGCTACTGAACCTCCTAATGACGGACTTATGGAACGACAACCAGTTGGAAGGAACGCAAGTTTTATTACCAAACCAATGTGGAGGAATATCTTAGGTCAAAGTTTGTATCAACTAATTGTCCTCGGAGTTCTAAATTTTGAGGGGAAGCGGCTATTGGGACTAAGTGGCCCAGATTCAACTGCAGTACTCAACACCTTGATATTCAACTCCTTTGTACTTTGCCAGGTGTTCAATGAGATAAACAGCAGAGAAATTGAAAAGATAAACATATTCAGAGGCATGTTTGACAGCTGGATATTTTTAAGTGTTATTCTCGCCACAGCAGTATTTCAAGTAATCATAGTTGAGTTCCTTGGAACATTTGCCAGCACAGTTCCTCTAACCTGGCAATTCTGGTTACTCAGTGTGTTATTTGGTGTACTTAGCATGCCTTTAGCTGTTATCCTCAAATGCATACCAGTTGAAAGAAATACAACAACAAAGCATCATGATGGTTACGAGGCACTTCCTTCTGGTCCTGACCTGGCATAA 2982 0.4145 MEGLLKDFELEDKDRSIEALTRWRSAVALVKNPRRRFRNVADLAKRAVAQEKQRKIQGKFRAVINVQRAALHFTDAIASPEFEVSEKTREAGFGIEPDDIASVVRSHDYKNFTKVGEVHGITSKLSVSVDEGVRQDSIHISIGIGLPTEGWPKGVYDGLGILLSIFLVVSVTAISDYQQSLQFRDLDKEKKKIDVHVTRDGKRQKISIYDLVVGDIVHLSTGDQVPADGVFIHGYSLLIDESSLSGESEPVNIDGRRPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFAVLTFLVLTVRFVIEKAVHGDFSSWSSEDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMNDRALVRHLSACETMGSASCICTDKTGTLTTNHMVVDKIWICEKTTQIKGDESTDKLKSEISDEVLSILLQAIFQNTSSEVVKDKEGKWTILGTPTESAILEFGLVSGGDFDAQRKSCKILKVEPFNSDRKRMSVLVGLPDGRVRAFCKGASEIVLKMCDKIIDSNGTTVDLPQEKAKIVNDIIDGFAHEALRTLCLAVKDIDETQGETIIPENGYTLIAIVGIKDPVRSGVKEAVQKCLAAGISVRMVTGDNINTAKAIARECGILTEGGIAIEGPEFRNLSPEQMKDIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVKVAKWGRAIYINIQKFVQFQLTVNVVALITNFVSACITGAAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERQPVGRNASFITKPMWRNILGQSLYQLIVLGVLNFEGKRLLGLSGPDSTAVLNTLIFNSFVLCQVFNEINSREIEKINIFRGMFDSWIFLSVILATAVFQVIIVEFLGTFASTVPLTWQFWLLSVLFGVLSMPLAVILKCIPVERNTTTKHHDGYEALPSGPDLA 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7482g00001 993 PRINTS P-type cation-transporting ATPase superfamily signature 409 423 - -
Vifaun7482g00001 993 PRINTS P-type cation-transporting ATPase superfamily signature 240 254 - -
Vifaun7482g00001 993 PRINTS P-type cation-transporting ATPase superfamily signature 710 729 - -
Vifaun7482g00001 993 PRINTS P-type cation-transporting ATPase superfamily signature 734 746 - -
Vifaun7482g00001 993 PRINTS P-type cation-transporting ATPase superfamily signature 607 618 - -
Vifaun7482g00001 993 PRINTS P-type cation-transporting ATPase superfamily signature 629 639 - -
Vifaun7482g00001 993 FunFam Calcium-transporting ATPase 727 973 - -
Vifaun7482g00001 993 CDD P-type_ATPase_Ca_PMCA-like 140 843 - -
Vifaun7482g00001 993 FunFam Calcium-transporting ATPase 169 292 - -
Vifaun7482g00001 993 SFLD C1.7: P-type atpase like 391 763 - -
Vifaun7482g00001 993 FunFam Calcium-transporting ATPase 607 755 - -
Vifaun7482g00001 993 SUPERFAMILY Calcium ATPase, transmembrane domain M 140 971 IPR023298 -
Vifaun7482g00001 993 Pfam Cation transporting ATPase, C-terminus 795 968 IPR006068 -
Vifaun7482g00001 993 NCBIfam calcium-translocating P-type ATPase, PMCA-type 140 972 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Vifaun7482g00001 993 SFLD p-type atpase 391 763 IPR044492 -
Vifaun7482g00001 993 ProSitePatterns E1-E2 ATPases phosphorylation site. 411 417 IPR018303 -
Vifaun7482g00001 993 Gene3D - 15 76 - -
Vifaun7482g00001 993 Gene3D - 180 292 - -
Vifaun7482g00001 993 PANTHER CATION TRANSPORTING ATPASE 140 971 - -
Vifaun7482g00001 993 Pfam Cation transport ATPase (P-type) 465 549 - -
Vifaun7482g00001 993 Gene3D - 406 755 IPR023214 -
Vifaun7482g00001 993 PRINTS H+-transporting ATPase (proton pump) signature 567 585 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifaun7482g00001 993 PRINTS H+-transporting ATPase (proton pump) signature 710 726 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifaun7482g00001 993 PRINTS H+-transporting ATPase (proton pump) signature 742 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifaun7482g00001 993 Gene3D - 419 614 IPR023299 GO:0000166
Vifaun7482g00001 993 FunFam Calcium-transporting ATPase 419 614 - -
Vifaun7482g00001 993 FunFam Calcium-transporting ATPase 15 75 - -
Vifaun7482g00001 993 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 415 619 IPR023299 GO:0000166
Vifaun7482g00001 993 Gene3D - 153 968 - -
Vifaun7482g00001 993 SUPERFAMILY Calcium ATPase, transduction domain A 195 290 IPR008250 -
Vifaun7482g00001 993 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 46 IPR024750 GO:0005516
Vifaun7482g00001 993 Pfam E1-E2 ATPase 193 387 - -
Vifaun7482g00001 993 NCBIfam HAD-IC family P-type ATPase 348 432 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifaun7482g00001 993 NCBIfam HAD-IC family P-type ATPase 161 331 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifaun7482g00001 993 NCBIfam HAD-IC family P-type ATPase 505 655 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifaun7482g00001 993 NCBIfam HAD-IC family P-type ATPase 675 798 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifaun7482g00001 993 SUPERFAMILY HAD-like 408 815 IPR036412 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7482g00001 59 990 Primary Pumps ATPases AT3G57330 70.606 0.0 1410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun7482g00001 K01537 - gmx:100791934 1574.3