Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7439g00002 ATGGCTTTCTTCTACATCTTTTTCTTTTTAGCTTTGCTAATCTTCAATTTACTTGTCAAAAATATAAGAACCACAAATGAAATCTCCAAATTTAACCCCCCACCAAGTCCACCATCATTACCCATCATAGGCCACCTTCACCTTATAGGCTCCATCATACCAAAATCATTCCAAAAACTTTCTCAACGCTATGGCCCTTTAATTCATCTCAAACTAGGTGCCTCGACTTCTATAATTGTCTCCAATGCACAAGTTGCAAAACAAGTCATGAAAACACATGACCTTAACTTTTGTTACCGACCCCAATTTGGATCCTCTCATGATTTTTTATACAAAGGATCATATTTCATCACTGCTCCATATGGTCCTTATTGGAGATTCATGAAAAAGTTGTGTGTTACTAAATTACTCTCTAGCTCACAACTTGGTCGTTTCTTGCATATTAGAGAGCAAGAATTAGAGATTCTCATGAAATCTTTTGTGGTTTGTTCTAATGAAAAAAGGTCAACGGATTTGTGTTTGGATTTCACTATTTTTAGTAATAATATTTTGTGTCGTATGGCAATGGGAACAACTTTATTTGACAAAGATATTATTAGATGTTTAGTCAGGGAGTTTATGCATGTAGGAGCGAAATTGAGTATGGGTGAAGTGTTTGGGCCTTTGGGAAAGTTGGATTTGTTTGGATATGGGAAAAAGCTTAGAAAAATAGTTGGTGAATTTGATCATATTTTGGAAGTTTTCTTGAAGGAACATGAAGAGAGAAACATTGAGGATTGTCAAGGAGACATGATGGATGTTTTATTAGAAGTGTATAGGAATCCAAATGCTGAAGTGAGGTTAACAAGGAATGATATCAAAGCCTTCTTCTTAGACATTTTCTTGGCTGGAACAGACACATCTTCAGTGACAATGCAATGGGCCATGGCAGAGATGATAAACAATCCAAATATCCTAAGGAAATTAAGGGCTGAGATTAAATCTGTAGTGGGACCTACCAGATTAGTCAGAGAGTCAGATGTTTCAAAAATGCCTTACCTACAAGCTTGTGTAAAAGAAGTATTAAGACTTCATCCATCTGCACCGTTCGCTCTTAGACAATCAGCAGAGGATTGCAAAATCAACGGCTACGATGTAAAGGCACAAACAAGGACATTGATTAATGTTTATGCCATTATGAGAGACCCACAATCATGGGTCAATCCTGAAGAGTATATACCTGAAAGATTCTTAGATAGTGGTGATGAGATCGACGGTGGAGATGAACATGTGAGTAAGATGGACGGTGGGGATGATTTTAGGTTTATTCCATTTGGGTTTGGGAGGAGGGGTTGTCCTGGGTCTTCACTTGCTTTGAGGGTTATAGAAGTAACAATTGCTGCATTGGTTCAATGTTTTGAGTGGGAAGTTAAAGGTGGAGGTAAAGTTGATTTGGAAGAAGGTTCGTCGTTTTCTGTGGGATTAGCAAAACCGCTAGTTTGTTACCCTGTTACTTGTTTTAATCCTTTTGAAGTTTGTGATTAG 1524 0.3753 MAFFYIFFFLALLIFNLLVKNIRTTNEISKFNPPPSPPSLPIIGHLHLIGSIIPKSFQKLSQRYGPLIHLKLGASTSIIVSNAQVAKQVMKTHDLNFCYRPQFGSSHDFLYKGSYFITAPYGPYWRFMKKLCVTKLLSSSQLGRFLHIREQELEILMKSFVVCSNEKRSTDLCLDFTIFSNNILCRMAMGTTLFDKDIIRCLVREFMHVGAKLSMGEVFGPLGKLDLFGYGKKLRKIVGEFDHILEVFLKEHEERNIEDCQGDMMDVLLEVYRNPNAEVRLTRNDIKAFFLDIFLAGTDTSSVTMQWAMAEMINNPNILRKLRAEIKSVVGPTRLVRESDVSKMPYLQACVKEVLRLHPSAPFALRQSAEDCKINGYDVKAQTRTLINVYAIMRDPQSWVNPEEYIPERFLDSGDEIDGGDEHVSKMDGGDDFRFIPFGFGRRGCPGSSLALRVIEVTIAALVQCFEWEVKGGGKVDLEEGSSFSVGLAKPLVCYPVTCFNPFEVCD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7439g00002 507 Gene3D Cytochrome P450 24 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vifaun7439g00002 507 Pfam Cytochrome P450 34 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 FunFam Cytochrome P450 family protein 25 494 - -
Vifaun7439g00002 507 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 SUPERFAMILY Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun7439g00002 507 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 486 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7439g00002 13 503 Cytochrome P450 AT2G42250 48.491 3.42e-170 488