Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7064g00002 ATGGGAAGATCACCTTGTTGTGATAAAACTGGACTCAAGAAAGGTCCATGGACACATGAAGAAGATCTTTTGCTTGTCAACTATATTAATACTCATGGAGCTGGAAATTGGCGCAACCTCCCCAAAAATGCTGGTCTTCAAAGATGTGGTAAGAGTTGTCGGCTTCGTTGGACGAATTACTTAAGACCTGATATCAAGAGAGGGAGATTCTCGTTTGAAGAAGAAGAAGCTATCATTCAACTTCATAGTGTCTTGGGAAACAAATGGTCGGCTATAGCGGCTAGATTACCGGGAAGAACAGATAATGAAATAAAGAATTACTGGAACACGCACATTAGGAAAAGACTACTTCGAAGTGGAATTGATCCGGTCACTCATACACCGCGTCTTGATCATCTATTCGACATGTCGTCCATTAATATTCTGAGATCAGCTTTATTAGGATCCAATCCATCATTTCTGAATCTATTAGGTGGTGCTCAAGCTTTGATGAATCCAGAATTGTTAAAACTAGCTGCAACTGCCACACTATTAAACAACAACATGAATTTGGTTTCACAGAATCAACAACAGTTCAATAATGTTGCTAATTATTCTACTCAACAACAAGCACAAAATAATCAAGTTTCTCTACAAGATCAGTTTCAAATACCGACTCAAACTCACAACAATATAATCACTAGTTCGATTTCAGCTGAAAATTCAAATCCTTGTAATTTTGAGGAGGATTTAATTTCTAAACAATATTCAGAACTGTTTCATTGTCTTAATCATGGAAATAATAACAATATGGGATATGAATCGGTTATATCGTCTACGCCGTTATCGACGACACCGACACCGACACCGACACCATCATCAACTTATGTGAATAGCTGCACAGAGGAAGAGAGAGATACATATTGCAGTGACATATTCAAGTTTGAAATTCCAGAGAGTGGTTTGGATATTAATGATTTCTTGTAA 966 0.3737 MGRSPCCDKTGLKKGPWTHEEDLLLVNYINTHGAGNWRNLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRSGIDPVTHTPRLDHLFDMSSINILRSALLGSNPSFLNLLGGAQALMNPELLKLAATATLLNNNMNLVSQNQQQFNNVANYSTQQQAQNNQVSLQDQFQIPTQTHNNIITSSISAENSNPCNFEEDLISKQYSELFHCLNHGNNNNMGYESVISSTPLSTTPTPTPTPSSTYVNSCTEEERDTYCSDIFKFEIPESGLDINDFL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7064g00002 321 FunFam Transcription factor MYB39 69 130 - -
Vifaun7064g00002 321 CDD SANT 69 112 IPR001005 -
Vifaun7064g00002 321 FunFam MYB-related transcription factor 13 66 - -
Vifaun7064g00002 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Vifaun7064g00002 321 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Vifaun7064g00002 321 CDD SANT 16 61 IPR001005 -
Vifaun7064g00002 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Vifaun7064g00002 321 MobiDBLite consensus disorder prediction 271 291 - -
Vifaun7064g00002 321 Gene3D - 69 116 - -
Vifaun7064g00002 321 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Vifaun7064g00002 321 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Vifaun7064g00002 321 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Vifaun7064g00002 321 SMART sant 13 63 IPR001005 -
Vifaun7064g00002 321 SMART sant 66 114 IPR001005 -
Vifaun7064g00002 321 Gene3D - 13 66 - -
Vifaun7064g00002 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 247 - -
Vifaun7064g00002 321 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7064g00002 1 321 MYB Transcription Factor Family AT4G21440 47.185 8.43e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vifaun7064g00002 Myb_DNA-binding 4.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun7064g00002 K09422 - gmx:102668351 394.43