Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun7050g00001 ATGCGTCACCATGGCTATCTTACGTGGGAAGCACGTGTCAAGGTTCTCCTTGGCACAGCCAAAGCGCTTGCGTATTTGCACGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCGAGCAACATATTAATCGACGATGATTTCAATGCTAAGGTGTCTGATTTTGGTCTGGCCAAATTATTGGGTGCCGGAAAGAGCCGTGTCACAACCCGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATGCAAATACTGGCCTTCTAAACGAGAAGAGTGATGTATATAGCTTTGGTGTTTTGCTACTGGAAGGAATTACCGGAAGAGATCCAGTTGATTATGGCCGTCCGACAAATGAAGTGAATCTAGTTGATTGGCTGAAGATGATGGTTGGAAGCAGGAGATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAAACCATCAACCAGAGCTTTGAAACGCGCTCTCTTAACTGCTTTACGATGTGTTGATCCAGATTCCGAGAAAAGACCAAAGATGAGCCAAGTTGTACGAATGCTGGAGTCCGAGGAATACCCTTTAGCAAGAGAGGACCGAAGGCAGAGAAGAAGAAATCAAGGAGGTATTGCAGAAATTGAATCGCAGAGGGAATTTTCCGACACGGACAGGAGTGAGATTCAGGGTTCTAGAGAAGAGAGCAGAGGGTAG 702 0.4601 MRHHGYLTWEARVKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSRVTTRVMGTFGYVAPEYANANTGLLNEKSDVYSFGVLLLEGITGRDPVDYGRPTNEVNLVDWLKMMVGSRRSEEVVDPNIEVKPSTRALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPLAREDRRQRRRNQGGIAEIESQREFSDTDRSEIQGSREESRG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun7050g00001 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 34 46 IPR008271 GO:0004672|GO:0006468
Vifaun7050g00001 233 ProSiteProfiles Protein kinase domain profile. 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun7050g00001 233 SUPERFAMILY Protein kinase-like (PK-like) 2 192 IPR011009 -
Vifaun7050g00001 233 Gene3D Transferase(Phosphotransferase) domain 1 1 209 - -
Vifaun7050g00001 233 Pfam Protein kinase domain 7 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun7050g00001 233 PANTHER OS01G0323000 PROTEIN 1 212 - -
Vifaun7050g00001 233 MobiDBLite consensus disorder prediction 189 233 - -
Vifaun7050g00001 233 SMART serkin_6 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun7050g00001 233 FunFam Putative receptor-like serine/threonine-protein kinase 1 201 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun7050g00001 7 188 Trihelix Transcription Factor Family AT1G70460 51.613 4.81e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Vifaun7050g00001 Pkinase 3.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun7050g00001 - - gmx:100787014 408.297