Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6946g00002 ATGGCGGTCGATGGTCCGTGTTTTGTTGAATGGAAAGAACAGTTTGTTTCGCAAGAGCGCGGCCATCGTGTAGTTCACTATTACCTAAAGGATTCTGCTGGAGAATCATTCCTTGCAGTTGTTGGCACTGAGAGGAGTGTTAGACACATGTGCTATGTTATTGCTGAGGATTTCCTCGAAATATGCGGAATGGAGGGTTTGTTTCCACCGGGTTTTAAATGGAGATCTAGAAGAGAGGTGGTCGATTGGCTGACATCGATGTTATCTAAGCAGCATCTGCAGGGCGATAGAAGTGTAAGGCCTGCACAAAATTTGGATCTAGCTCATGAGATCGAAAATGATAATGTTAAAGAAGTTACTGGTCTTTCTGCACAAATGGTGGATGACAAGGACATTCCAAAGAGTAACTCCAAATTATTCAATTCAGACATCCTTTGGTCAGGACTTGCGTGGACATGTGGCAAACAACTCAAGCACTATCCGGCTTTTTGTAGGAATGGCATCCAAATAGGGATTCAGTCCTTTGTTTTTGTCATGGGCAATGGAGAGAAACATTATGTTGCATATTTAGACGATATGTATGAAGACAGAAGGGGGCAGAAAAAGGTTAAAGTAAGGTGGTTTCATCATAATCAGGAAGTCAAGGGTGCAATTCCCGTACGAAATCCTCACCCTCGGGAAGTTTTCATTACATCTTATTCTCAAGTCATCAGCGCAGAGTGTGTTGACGGTCCCGCCGCAGTCTTAACTCGTGAACACTACGAAAAATGCACACCTTATTTTTCACCCTCTTCAATTGACAGAATACATTTGTGCTTTAGGCAATTAAAAGGCAACAAAGTCAAGCCCTTCGACTTAAGTAAACTGCGCGGCTACTATACTCAGCCAGCTCTTTCTTCCTTGCACGTTGATAGTATCCACAACATGGAGGCTCACAGCAACAGCCTCACAGGAGAAGACGAAGATTTGGATGTCGGTGATGATACAAAGCGTGGAGCCAAAAGGAGTAGAAGCGTTGAGGATTCTCCTCCTTCTTGTAACGGTCGACAAGGGGTTAGGAAGTTGATTAGAAGTAATCAAATAATGGGATATCAAACTTTCCAGGTTGTGAATTATGTGAGGCCAGATAGGAGATTGCTTTCTCTAAAACCGATTGAATGTCAACATTGGTATAACCCGATCTACAAGGTTGATGACAAGATAGAGGTGCTCTGTCAAGATAGTGGCATCCGAGGCTGCTGGTTCAGGTGCACAATTTTACAGGTTGCTCGGAAAAAGCTGAAAGTCCTATATGATGATGTTCAGGATGAAGATGGAAGTGGAAATCTTGAGGAGTGGATCCCTGCTTTTAGGTTGGCCAAGCCTGATAAACTTGGGATGAGACAACCTGGCCGATTGACGATAAGGCCAGCTCCACCTTTTGAAGAACATGAAGTGATTGTTGAGGTTGGAACTTCCGTTGATGCATGGTGGAGTGACGGCTGGTGGGAGGGTGTTGTAACTACAATTGAGAACTGTGGAGATGACAGTGTTCAAGTCTACTTTCCTGGTGAAAGCTTGCAAATGACTGTACATAGAAAGGATTTACGAATATCTCGAGATTGGTTCGACGACACATGGATAAGTATAAAGGCAAAGCCTGATATAACCCCAACTATATTAACTTCTGATAGCTTTAACACGAATCTCTCCTTGTCTCCATCCATGGCTAAAGACGAAAACTCTAATGGTTTTGCTAATTCAAGTCATGACATTCCTGCTAGTGAGAAGTCTAACAAACTCGATATTTTTGAAGAGAAACTTGTATGCTGTGATATTGCTGAAGATGAGGTTGGTCTCCTAAATGATAAATCTCCTTCAGAAAAAGATACTCAAGTTGGTGATATCAAAGATAATGGTTGTAATGATGATAAAGACATCAGTGAGAATGATGATAACAAGAATGATTATAGTGACAATAGGGATGTGGAGGTGATTGGGACTTCTGGAGTCGAGTGTAAAGGTGCACAACTAATGGAAGTGGCAGTGTGA 2031 0.4244 MAVDGPCFVEWKEQFVSQERGHRVVHYYLKDSAGESFLAVVGTERSVRHMCYVIAEDFLEICGMEGLFPPGFKWRSRREVVDWLTSMLSKQHLQGDRSVRPAQNLDLAHEIENDNVKEVTGLSAQMVDDKDIPKSNSKLFNSDILWSGLAWTCGKQLKHYPAFCRNGIQIGIQSFVFVMGNGEKHYVAYLDDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAECVDGPAAVLTREHYEKCTPYFSPSSIDRIHLCFRQLKGNKVKPFDLSKLRGYYTQPALSSLHVDSIHNMEAHSNSLTGEDEDLDVGDDTKRGAKRSRSVEDSPPSCNGRQGVRKLIRSNQIMGYQTFQVVNYVRPDRRLLSLKPIECQHWYNPIYKVDDKIEVLCQDSGIRGCWFRCTILQVARKKLKVLYDDVQDEDGSGNLEEWIPAFRLAKPDKLGMRQPGRLTIRPAPPFEEHEVIVEVGTSVDAWWSDGWWEGVVTTIENCGDDSVQVYFPGESLQMTVHRKDLRISRDWFDDTWISIKAKPDITPTILTSDSFNTNLSLSPSMAKDENSNGFANSSHDIPASEKSNKLDIFEEKLVCCDIAEDEVGLLNDKSPSEKDTQVGDIKDNGCNDDKDISENDDNKNDYSDNRDVEVIGTSGVECKGAQLMEVAV 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6946g00002 676 MobiDBLite consensus disorder prediction 312 350 - -
Vifaun6946g00002 676 CDD Tudor_Agenet_AtDUF_rpt1_3 395 473 - -
Vifaun6946g00002 676 Gene3D - 137 283 IPR043151 -
Vifaun6946g00002 676 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Vifaun6946g00002 676 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 395 609 - -
Vifaun6946g00002 676 MobiDBLite consensus disorder prediction 314 338 - -
Vifaun6946g00002 676 Pfam Agenet domain 398 473 IPR008395 -
Vifaun6946g00002 676 Pfam BAH domain 174 262 IPR001025 GO:0003682
Vifaun6946g00002 676 MobiDBLite consensus disorder prediction 614 654 - -
Vifaun6946g00002 676 SMART BAH_4 168 277 IPR001025 GO:0003682
Vifaun6946g00002 676 SMART agenet_At_2 393 458 IPR014002 -
Vifaun6946g00002 676 SMART agenet_At_2 479 537 IPR014002 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6946g00002 407 540 PHD Transcription Factor Family AT5G58610 30.000 2.04e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun6946g00002 - - gmx:100306240 956.822