Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6864g00001 ATGCAATCTCACTCATTCTCCTACACATGTGATACTGTTGACGAGTCCTCCATTTCACTCTCACTTGGCCCTCCTGGTACTCACCACAAACCCAAACTATTGTCCACAACAAATCACTCACCTTCTACTACTCTGCATCATAATCATCACCAAAACCTTACCACTGATGGTGATGACCAGAATGGTGTAACAGTCGCACTTCGCATTGGCCTTCCAACCACCATATCACAAAACAACACAACTATTACCAAACCAGATCATCATCATTTTCCTTCCGCTCCGATTCAAGGTCAATATTGGATCCCTTCTCCTGCTCAAATCCTTATTGGACCAACACAGTTCTCTTGCACAGTCTGCAATAAAATGTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCTCAATATAGGAAAGGACCAGAATCTCTAAGGGGAGTAAAACCAGCTTCATCCATGTTGAGGCTTCCGTGCTATTGCTGTGCAGAGGGATGCAAAAACAACATAGAGCATCCAAGGTCAAGACCACTGAAGGATTTCAGGACACTTCAGACACACTACAAGAGGAAACATGGAGCAAAGCCATTTGGGTGTAGAAAGTGTGGGAAACCCTTTGCAGTGAGAGGAGACTGGAGAACACATGAGAAAAACTGTGGAAAACTTTGGTTCTGCATCTGTGGATCTGACTTCAAACACAAGAGATCACTCAAAGATCATGTTCGTGCTTTCGGTGACGGTCACGCTCCACACACCGTCGAGAGTTGTGAAGATCAGGAAGTTTTGTTAGGTGATGAATACGATGACGATTTTGAAGGAGATGAAAATGATGAAGATGATGATGATGATGATAATATTGATAACATGGATGGAATAATTTTTGGTTTTAATTAA 900 0.4267 MQSHSFSYTCDTVDESSISLSLGPPGTHHKPKLLSTTNHSPSTTLHHNHHQNLTTDGDDQNGVTVALRIGLPTTISQNNTTITKPDHHHFPSAPIQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGVKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCEDQEVLLGDEYDDDFEGDENDEDDDDDDNIDNMDGIIFGFN 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6864g00001 299 PANTHER ZINC FINGER PROTEIN WIP2 23 268 IPR043584 GO:0003700|GO:0010468
Vifaun6864g00001 299 FunFam Zinc finger protein WIP2 168 250 - -
Vifaun6864g00001 299 SUPERFAMILY beta-beta-alpha zinc fingers 182 219 IPR036236 -
Vifaun6864g00001 299 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 141 IPR013087 -
Vifaun6864g00001 299 MobiDBLite consensus disorder prediction 31 61 - -
Vifaun6864g00001 299 MobiDBLite consensus disorder prediction 19 61 - -
Vifaun6864g00001 299 MobiDBLite consensus disorder prediction 269 291 - -
Vifaun6864g00001 299 MobiDBLite consensus disorder prediction 269 290 - -
Vifaun6864g00001 299 Gene3D Classic Zinc Finger 156 246 - -
Vifaun6864g00001 299 SUPERFAMILY beta-beta-alpha zinc fingers 91 135 IPR036236 -
Vifaun6864g00001 299 ProSitePatterns Zinc finger C2H2 type domain signature. 116 136 IPR013087 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6864g00001 14 266 C2H2 Transcription Factor Family AT1G13290 69.767 8.52e-119 342
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vifaun6864g00001 None None None