Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6746g00001 ATGAAAAATTGCTGGGCAAATCTATGGCTTATGAACAAGAAACAAAAACCAAAGCAGAAACCCCAAAAACTGGTGGTGCTACAAAGGCCCACGGAAGAAGGGATTGAGTCTAGATACAAGTTAGATAGAGGAGATTTTGGACGTGGTAATCTTTTTGATCGCATGGATGCTATAGGACATTTCACCGATGCTAACCTTTTGGATCGCATCAATGGTGGAGGACATTTCACCGAAAGCAGAGCTGCTTCTTTCATTAATACCATCGTCCAAGTTGTTCAGATGTGCCACAAACATGGTGTGATGCATAGGAATCTAATACTTGAAAACATTTTGTTTGCAAATAATATGGGAACAGCGCCCTTAAAAGTTACTGACTTTGCTTTGTCAATTTTCTTTAAACCAGGTGAAAGATTTCATGAGATAGTTGGTAATCTATATTACATGGCCCCTGAATTGTTAATGAAAAATTATGGTCCTGAAGTTGATATATGGAGTGTTGGAGTAATTCTTTACATCTTACTTTGTGGTGTCCCCCCGTTTTGGGCAGAAACTAAGCAGCGAGTTTCTCAAGCAATTATACGGTCGGTTATTGACTTTAAAAGAGATCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTTAAGAAGATGCTTGATCCTGATTCTAAGCGCCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGTTTCTGAATGGTAAGACAGCTTCTAATGTTTCTTTACGAGAAACCGTCAATGTACGGCTCATGCAATATTTTGCAATGAACAAACTTAAGAAAACAGCATTGAGGGTGATTGCAGATCATTTGTCTGTAGAAGAAGTTGCTGGAATTAAAGAGGGATTCGATGTGATGGACACAGAAAATAATGGGAAAATTAACATTGACGAACTTCGAGTAGGGTTGATTAAGCTAGGCCACCAAATTCCTGATGCAGATGTCCAAATACTTATGGAAGCTGGTGATGTAGACAAAGATGGGTACCTAGATTATGGGGAGTTTGTAGCCATTTCTATTCATCTGAGAAAGATATCCCATGATGAACACCTACACAGAGCATTCCAATTTTTCGACAAAAATGAATCTGGGTATATTGAACTTGAGGAGTTAAGTAAGGCTTTAGGTGACGAGATTGACAAAAACAGTGAAGAAGTCATTAATGCAATTATGCATGATGTGGACACAGACAAGGATGGAAAAATAAGTTATGAGGAATTTGCTGCAATGATGAAGGCTGGAACTGATTGGAGAAAAGCATCAAGGCAGTATTCGCGAGAGAGGTTTAACAGTAAAAATTGA 1323 0.3893 MKNCWANLWLMNKKQKPKQKPQKLVVLQRPTEEGIESRYKLDRGDFGRGNLFDRMDAIGHFTDANLLDRINGGGHFTESRAASFINTIVQVVQMCHKHGVMHRNLILENILFANNMGTAPLKVTDFALSIFFKPGERFHEIVGNLYYMAPELLMKNYGPEVDIWSVGVILYILLCGVPPFWAETKQRVSQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPDSKRRLTAQEVLDHPWFLNGKTASNVSLRETVNVRLMQYFAMNKLKKTALRVIADHLSVEEVAGIKEGFDVMDTENNGKINIDELRVGLIKLGHQIPDADVQILMEAGDVDKDGYLDYGEFVAISIHLRKISHDEHLHRAFQFFDKNESGYIELEELSKALGDEIDKNSEEVINAIMHDVDTDKDGKISYEEFAAMMKAGTDWRKASRQYSRERFNSKN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6746g00001 440 ProSiteProfiles EF-hand calcium-binding domain profile. 317 352 IPR002048 GO:0005509
Vifaun6746g00001 440 ProSitePatterns EF-hand calcium-binding domain. 366 378 IPR018247 -
Vifaun6746g00001 440 SUPERFAMILY EF-hand 263 431 IPR011992 -
Vifaun6746g00001 440 FunFam Calcium-dependent protein kinase 7 247 422 - -
Vifaun6746g00001 440 ProSiteProfiles EF-hand calcium-binding domain profile. 281 316 IPR002048 GO:0005509
Vifaun6746g00001 440 SUPERFAMILY Protein kinase-like (PK-like) 63 250 IPR011009 -
Vifaun6746g00001 440 CDD EFh 357 419 IPR002048 GO:0005509
Vifaun6746g00001 440 ProSiteProfiles EF-hand calcium-binding domain profile. 353 388 IPR002048 GO:0005509
Vifaun6746g00001 440 Pfam Protein kinase domain 65 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun6746g00001 440 ProSitePatterns EF-hand calcium-binding domain. 402 414 IPR018247 -
Vifaun6746g00001 440 ProSiteProfiles Protein kinase domain profile. 1 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun6746g00001 440 Pfam EF hand 287 307 IPR002048 GO:0005509
Vifaun6746g00001 440 Pfam EF-hand domain pair 312 344 IPR002048 GO:0005509
Vifaun6746g00001 440 Gene3D - 247 421 - -
Vifaun6746g00001 440 ProSiteProfiles EF-hand calcium-binding domain profile. 389 424 IPR002048 GO:0005509
Vifaun6746g00001 440 Gene3D Transferase(Phosphotransferase) domain 1 62 246 - -
Vifaun6746g00001 440 PANTHER SERINE/THREONINE-PROTEIN KINASE 65 414 - -
Vifaun6746g00001 440 FunFam calcium-dependent protein kinase 13 66 246 - -
Vifaun6746g00001 440 SMART efh_1 321 349 IPR002048 GO:0005509
Vifaun6746g00001 440 SMART efh_1 357 385 IPR002048 GO:0005509
Vifaun6746g00001 440 SMART efh_1 393 421 IPR002048 GO:0005509
Vifaun6746g00001 440 SMART efh_1 285 313 IPR002048 GO:0005509
Vifaun6746g00001 440 Pfam EF-hand domain pair 356 419 IPR002048 GO:0005509
Vifaun6746g00001 440 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6746g00001 64 438 EF-hand Containing Proteins AT5G19450 71.543 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vifaun6746g00001 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun6746g00001 K13412 - gmx:100778471 598.971