Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6657g00002 ATGTTCAAATTCCTCAAAGACGTTGTTGGCGGATCTGGAACCGGCATCAAAGATCTCCCTTACAACATCGGCGAACCTTATCATTCCGCTTGGGGTTCGTGGATTCACCACCGCGGCACTTCCAAGGATGACGGTTCACCGGTTTCGATTTTTACTTTATCTGGAAGTAATGCTCAGGATGGACATTTAGCTGCGGGTCGAAATGGAGTCAAGCGTCTACGAACTGTTAGGCATCCAAATATTTTGTCGTTTCTTCATAGTACCGAGATCGAAACTTTTGATGGTGGTTCTTCTAAGGTCACGATATATATTGTGACTGAACCTGTGATGCCATTGTCTGATAAGGTTAAGGAGTTGGGACTTGAAAGTACACAAAGGGATGAATATTATGCTTGGGGACTGCTTCAGATATCGAAAGCCGTAAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGCAATGTTTGCTTGGCTAGTGTTGTTGTCACCCAAACTCTGGACTGGAAACTTCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGCAATGAGACATCCTCACAGATGCTGCAATATGCATGGCTTGTTGCAACTCAATACAAATCAATGGAGCTGGCAAAATCTGACTGGGCTGTAATTAAGAAGTCTCCTCCGTGGGCCATTGATTCTTGGGGCATGGGCTGTCTTATTTATGAGCTATTCTCTGGTTTGAAGTTGAGCAAAACAGAAGAGTTACGTAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTGAGTTCCACACCTTCTCGTAGATTGAATACTTCAAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTCAGTTTGAAAGATAGTGTTGAGAAGGACACCTTCTTCCGCAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCGCTGACTGCATTGTTGAAAATGGGTTCGTGGCTTTCAGCTGAGGAGTTTCGTGTCAAGATTCTTCCAACAATAATTAAACTCTTTGCCTCCAACGATCGAGCTGTCCGTGTTAGCCTTCTCCAACATATTGATCAATTCGGAGAGTCATTATCAGCTCAAGCTGTTGATGAGCAGGTTTACCCTCACGTTGCTACTGGTTTCTCTGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAGTCCATGTTAGTTCTGGCTCCGAAACTGTCTCAAAGGACCTTGTCTGGGTCATTATTAAAGCATCTGTCGAAGTTACAGGTTGATGAAGAGGCAGCGATACGAACAAATACTACTATCTTGTTAGGAAATATTGCAAGTCACTTAAATGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACTGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCTAACTATGACATCAATGAAATTGCCACTCGGATTCTTCCTAATGTTGTTGTCCTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTATTGATCAATTTTTGCAGATTGCAAAGCAACATTATGAAAAGACAAACACATCAGAGGCTACTGGGGATGCAGGCACGGGAAGCTCATCAATTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACCCTGAAGGGCAAACCTTCTGATCACGCTCCAGTTGCTTCTGTGAGTTCGAGTGCCGTTACGTCAACATCTTCTAATGCCAGCTTAGTTGTAGATACTCCTTCACCAGCACCCATCCGTGTAAATTCCACACCAGATTTCACTGAGCACCATGCCCCTACATCTCCTACATCAACGGATGGCTGGGGGGAACTAGAAAATGGAATCGACGAGGAACCTGAAAATGACAAGGATGGGTGGGATGATCTTGAACCACTCGAAGATACAAAGCCAGCTCCAGCTCTTATCAACATTCAAGCAGCTCAAAGGCGGCCAGTTTCTCAACCAGTTTCACATACAAAAGCTTCAAGTATACGACCCAAAAGTACACCAAAGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTGCCATAGCAGCTCCTGCTCCAAAAACATCAAAACCTTTAAATTTGAAATCAGCTGCAACTGATGATGATGATCCCTGGGCGGCCATTGCAGCTCCTGCGCCCACTACAAGGGCCAAGCCTTTATCATCTGGCAGAGGTCGGGGAGCCAAACCTGCTGCTCCAAAATTAGGTGCTCAGAGGATAAACAGGACATCATCGTCCGGGATGTAA 2385 0.4398 MFKFLKDVVGGSGTGIKDLPYNIGEPYHSAWGSWIHHRGTSKDDGSPVSIFTLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDGGSSKVTIYIVTEPVMPLSDKVKELGLESTQRDEYYAWGLLQISKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNETSSQMLQYAWLVATQYKSMELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEELRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKILPTIIKLFASNDRAVRVSLLQHIDQFGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKHLSKLQVDEEAAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSNYDINEIATRILPNVVVLTIDPDSDVRSKAFQAIDQFLQIAKQHYEKTNTSEATGDAGTGSSSIPGNASLLGWAMSSLTLKGKPSDHAPVASVSSSAVTSTSSNASLVVDTPSPAPIRVNSTPDFTEHHAPTSPTSTDGWGELENGIDEEPENDKDGWDDLEPLEDTKPAPALINIQAAQRRPVSQPVSHTKASSIRPKSTPKLSKDEDDDLWGAIAAPAPKTSKPLNLKSAATDDDDPWAAIAAPAPTTRAKPLSSGRGRGAKPAAPKLGAQRINRTSSSGM 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6657g00002 794 MobiDBLite consensus disorder prediction 608 794 - -
Vifaun6657g00002 794 ProSiteProfiles HEAT repeat profile. 522 560 IPR021133 -
Vifaun6657g00002 794 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Vifaun6657g00002 794 Gene3D Transferase(Phosphotransferase) domain 1 109 278 - -
Vifaun6657g00002 794 SUPERFAMILY Protein kinase-like (PK-like) 37 286 IPR011009 -
Vifaun6657g00002 794 Gene3D - 281 561 IPR011989 -
Vifaun6657g00002 794 ProSiteProfiles HEAT repeat profile. 365 403 IPR021133 -
Vifaun6657g00002 794 MobiDBLite consensus disorder prediction 690 711 - -
Vifaun6657g00002 794 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 12 772 - -
Vifaun6657g00002 794 SUPERFAMILY ARM repeat 292 551 IPR016024 -
Vifaun6657g00002 794 MobiDBLite consensus disorder prediction 608 651 - -
Vifaun6657g00002 794 MobiDBLite consensus disorder prediction 654 671 - -
Vifaun6657g00002 794 ProSiteProfiles Protein kinase domain profile. 2 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6657g00002 70 290 MAP Kinase Kinase Kinase AT5G66850 23.605 1.37e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Vifaun6657g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun6657g00002 K08876 - gmx:100792884 1332.01