Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6657g00001 ATGTTCAAATTCCTCAAAGACGTTGTTGGCGGATCTGGAACCGGCATCAAAGATCTCCCTTACAACATCGGCGAACCTTATCATTCCGCTTGGGGTTCGTGGATTCACCACCGCGGCACTTCCAAGGATGACGGTTCACCGGTTTCGATTTTTACTTTATCTGGAAGTAATGCTCAGGATGGACATTTAGCTGCGGGTCGAAATGGAGTCAAGCGTCTACGAACTGTTAGGCATCCAAATATTTTGTCGTTTCTTCATAGTACCGAGATCGAAACTTTTGATGGTGGTTCTTCTAAGGTCACGATATATATTGTGACTGAACCTGTGATGCCATTGTCTGATAAGGTTAAGGAGTTGGGACTTGAAAGTACACAAAGGGATGAATATTATGCTTGGGGACTGCTTCAGATATCGAAAGCCGTAAGCTTCTTAAATAATGATTGTAAACTTGTTCATGGCAATGTTTGCTTGGCTAGTGTTGTTGTCACCCAAACTCTGGACTGGAAACTTCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGCAATGAGACATCCTCACAGATGCTGCAATATGCATGGCTTGTTGCAACTCAATACAAATCAATGGAGCTGGCAAAATCTGACTGGGCTGTAATTAAGAAGTCTCCTCCGTGGGCCATTGATTCTTGGGGCATGGGCTGTCTTATTTATGAGCTATTCTCTGGTTTGAAGTTGAGCAAAACAGAAGAGTTACGTAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGGCTACTGAGTTCCACACCTTCTCGTAGATTGAATACTTCAAAGCTTATAGAAAACAGTGAGTATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAAATTCTCAGTTTGAAAGATAGTGTTGAGAAGGACACCTTCTTCCGCAAGCTTCCAAATTTAGCAGAGCAGCTTCCTCGTCAGATTGTGTTAAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCCCTGCGCTGACTGCATTGTTGAAAATGGGTTCGTGGCTTTCAGCTGAGGAGTTTCGTGTCAAGATTCTTCCAACAATAATTAAACTCTTTGCCTCCAACGATCGAGCTGTCCGTGTTAGCCTTCTCCAACATATTGATCAATTCGGAGAGTCATTATCAGCTCAAGCTGTTGATGAGCAGGTTTACCCTCACGTTGCTACTGGTTTCTCTGATACATCTGCTTTTTTGAGGGAACTTACTCTCAAGTCCATGTTAGTTCTGGCTCCGAAACTGTCTCAAAGGACCTTGTCTGGGTCATTATTAAAGCATCTGTCGAAGTTACAGGTTGATGAAGAGGCAGCGATACGAACAAATACTACTATCTTGTTAGGAAATATTGCAAGTCACTTAAATGAAGGGACAAGAAAAAGAGTGTTGATTAATGCATTTACTGTCCGTGCTTTACGTGATACCTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCTAACTATGACATCAATGAAATTGCCACTCGGATTCTTCCTAATGTTGTTGTCCTCACAATTGATCCTGACAGTGATGTTCGATCTAAGGCATTTCAAGCTATTGATCAATTTTTGCAGATTGCAAAGCAACATTATGAAAAGACAAACACATCAGAGGCTACTGGGGATGCAGGCACGGGAAGCTCATCAATTCCAGGAAATGCAAGTTTACTTGGATGGGCTATGAGCTCCTTGACCCTGAAGGGCAAACCTTCTGATCACGCTCCAGTTGCTTCTGTGAGTTCGAGTGCCGTTACGTCAACATCTTCTAATGCCAGCTTAGATACTCCTTCACCAGCACCCATCCGTGTAAATTCCACACCAGATTTCACTGAGCACCATGCCCCTACATCTCCTACATCAACGGATGGCTGGGGGGAACTAGAAAATGGAATCGACGAGGAACCTGAAAATGACAAGGATGGGTGGGATGATCTTGAACCACTCGAAGATACAAAGCCAGCTCCAGCTCTTATCAACATTCAAGCAGCTCAAAGGCGGCCAGTTTCTCAACCAGTTTCACATACAAAAGCTTCAAGTATACGACCCAAAAGTACACCAAAGTTGAGCAAGGATGAAGATGATGATTTGTGGGGTGCCATAGCAGCTCCTGCTCCAAAAACATCAAAACCTTTAAATTTGAAATCAGCTGCAACTGATGATGATGATCCCTGGGCGGCCATTGCAGCTCCTGCGCCCACTACAAGGGCCAAGCCTTTATCATCTGGCAGAGGTCGGGGAGCCAAACCTGCTGCTCCAAAATTAGGTGCTCAGAGGATAAACAGGACATCATCGTCCGGGATGTAA 2379 0.4401 MFKFLKDVVGGSGTGIKDLPYNIGEPYHSAWGSWIHHRGTSKDDGSPVSIFTLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTEIETFDGGSSKVTIYIVTEPVMPLSDKVKELGLESTQRDEYYAWGLLQISKAVSFLNNDCKLVHGNVCLASVVVTQTLDWKLHAFDVLSEFDGSNETSSQMLQYAWLVATQYKSMELAKSDWAVIKKSPPWAIDSWGMGCLIYELFSGLKLSKTEELRNTASIPKSLLPDYQRLLSSTPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAAPALTALLKMGSWLSAEEFRVKILPTIIKLFASNDRAVRVSLLQHIDQFGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLVLAPKLSQRTLSGSLLKHLSKLQVDEEAAIRTNTTILLGNIASHLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSNYDINEIATRILPNVVVLTIDPDSDVRSKAFQAIDQFLQIAKQHYEKTNTSEATGDAGTGSSSIPGNASLLGWAMSSLTLKGKPSDHAPVASVSSSAVTSTSSNASLDTPSPAPIRVNSTPDFTEHHAPTSPTSTDGWGELENGIDEEPENDKDGWDDLEPLEDTKPAPALINIQAAQRRPVSQPVSHTKASSIRPKSTPKLSKDEDDDLWGAIAAPAPKTSKPLNLKSAATDDDDPWAAIAAPAPTTRAKPLSSGRGRGAKPAAPKLGAQRINRTSSSGM 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6657g00001 792 Gene3D Transferase(Phosphotransferase) domain 1 109 278 - -
Vifaun6657g00001 792 ProSiteProfiles HEAT repeat profile. 522 560 IPR021133 -
Vifaun6657g00001 792 MobiDBLite consensus disorder prediction 593 792 - -
Vifaun6657g00001 792 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Vifaun6657g00001 792 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 12 770 - -
Vifaun6657g00001 792 SUPERFAMILY Protein kinase-like (PK-like) 37 286 IPR011009 -
Vifaun6657g00001 792 MobiDBLite consensus disorder prediction 652 669 - -
Vifaun6657g00001 792 Gene3D - 281 561 IPR011989 -
Vifaun6657g00001 792 ProSiteProfiles HEAT repeat profile. 365 403 IPR021133 -
Vifaun6657g00001 792 MobiDBLite consensus disorder prediction 600 649 - -
Vifaun6657g00001 792 SUPERFAMILY ARM repeat 292 551 IPR016024 -
Vifaun6657g00001 792 ProSiteProfiles Protein kinase domain profile. 2 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun6657g00001 792 MobiDBLite consensus disorder prediction 688 709 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6657g00001 70 290 MAP Kinase Kinase Kinase AT5G66850 23.176 1.42e-06 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Vifaun6657g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun6657g00001 K08876 - gmx:100792884 1316.6