Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6589g00003 ATGGAATCAGGAGCATTTTCAGCCGCATCTCTTGTGGAAGACGTACTTCAGCAACACGGTCATCGCCTCAAGGATCTTGATTTAGAATTTAGGAAAGCAGAAGAAGCTGCATCAAGAAGATATGAAGCGGCCGGTTGGTTGAGAAAAATTATTGGAGTTGTTGCTGCTAAGGATTTACCCGCGGAGCCATCTGAACAAGAGTTTAGGCTGGTTTTGAGAAGTGGAATTATCTTATGTAATGCTATTAATAAAGTTCAATCTGGAGCTGTTCCTAAGGTTGTGGAGAGTCCGGTTGATTCTGCGCTGATCCCGAATGGGGCACCATTATCAGCTTATCAATATTTTGAAAATGTGAGGAATTTTATGGTGGCTGTACAAGAAATTGGACTTCCTACTTTTGAGCCATCTGATCTGGAGCAAGGAGGAAAATCATCCAGGATTGTGAATTGCGTTTTGGCTCTTAAGTCGTACTGTGAATGGAAACAGAATGGTGCAAATGGTGCGTGGAAGTTTGGTGGAAATCCCAAACCTAATATTTCTGCTAAATCTTTTGTGAGAAAAAACTCGGACCCATTCACTAATTCCTTGTCAAGGACTTCTTCAATCAATGAAAAAACTCTAGCTACTCTTAATTCTGATGTCGAGTCTAGTAAAATGTCTGGTTCCCTTTCTTTGAGTATGCTTGTTCATTCTATTCTGTCAGATAAGAAGCCAGAAGAAATTCCAATGTTGGTTGAATCTGTTTTGAATAAGGTAGTTGAGGAGTTTGAACACCGTATTGCAAGCCAAGGTGAACAGGCAAAAATTACTTTAAGAGATCATGTTTCTCAAAGAAACGGATCTGCCTCAAAGTTTGATAAAAAGGTGGAGAACAAGATTCATATGGTAGCTAAGAAAGAGGACATTCATAAAAATCGTGTGGCTGCTGAGGAATTGCAAACCAAACACCTTAATCAGAAAATGCTTTTTGACCAACAGCAAAGAGACATTCAAGAACTAAAGCTTACTCTTCACACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCGTGACGAATTTTCCAATCTTGGAATGCATATTCATGGATTAGCTAAGGCTGCTTCTGGATATCATAGAGTTCTGGAAGAAAATCGCAAACTATACAATGAAGTCCAAGATCTAAAAGGAAGTATAAGGGTATATTGTCGAATAAGACCCTTCTTTCCTGGACAACCAAACCAATTGAGCGCAGTAGAAAATATAGAAGATGGAACAATCACAGTTAGTATTCCTTCGAGGAATGGGAAGGGACAAAGATCCTTCAACTTTAACAAAGTCTTTGGACCATCTGCCACCCAAGCGGAGGTATTCCTGGATATGCAACCACTTATTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACAATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGAAATTCATAGCAGCTCTCACAAAGGGCTCAGTGTGCCAGATGCCAGCCTTGTCCCAGTGTCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCACAGGAACCGTGCTGTTGGAGCAACAGCCCTTAACGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGGCATCCGGAGCAACCATCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTGGATAAATCAGAGGCTACTGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCCTTATCAGCTTTGGGCGATGTCATAGCTTCTCTGGCTCATAAAAACTCACACATACCTTATAGAAATAGTAAACTCACACAATTGCTCCAAGATTCACTTGTTGCCGGGTTTATTTCAGGAGGACAGGCCAAGACCCTGATGTTTGTTCACATAAGTCCAGAAAGTGATGCAATTGGAGAGACAATTAGTACTTTAAAATTTGCAGAAAGAGTTGCAACAGTTGAACTTGGTGCTGCGCGAGTAAACAAAGATGGTGCAAATGTTAAAGAGCTCAAAGAACAGATTGCTAGCCTTAAAGCAGCACTGGCAAGAAAAGAAGGGGAATCGGAACATTCTTTTTCTGGAAGCTCTGAAAAATATAGGACAAAGACTGAGCTATCACCATATCATTTAAACCAACGGGTTGTAGACTCGGGCGACCGGTTTGGATACAGGCGACCAATGGTTGAAGTTGGCAACATAGAGCTTCAGAGTAAAACCATATTGAGACAGAAAACTAAAAGCATTGATTTCGATGAGATATCAGTAAATTCACCACCCTGGCCCCCAGTAAATAGTCTTGGACCAAACGACGGTGAGGATGAGAAAGAAACAGGTTCCGGAGAATGGGTTGATAAGGTAATGGTAAACAAGCTAGAAGCGAACAAAACTGACAACAACCTCTTGGATTGTTGGCAAGAAAGCAATGTAAACTTATCTGAGGCCTTTTATCAAACGTATCTCCAAGATTCTTCCAAAATGTATTCAGAACAGTCCTATAATATGTTCATGGGAGGAAACCAGTTTAATAGCATTATGGCTTCAGATGATAACATGGATGAGATCGACGCTGCAACCAGTGATTCCTCAGAACCTGACTTGCTTTGGCAATTTAATCATTCTAAACTTACCGGTTTGACCAATGGAATTGGATCAAAGACTATTATGAAATCTGTCTCAAAGCCAACAAAAAGCCCACAATTAAGCAAGAGTTCTGTTCATACTTCTCTTGGTCCTTCACCTTCATTGAAACAATCAAAAGTTGTCTCACATAAGACAGGGAGAAGTCCAGCTCCTGTTGACATGAAGCGTAAAATTGGGGGTAGAAAGTAA 2889 0.4057 MESGAFSAASLVEDVLQQHGHRLKDLDLEFRKAEEAASRRYEAAGWLRKIIGVVAAKDLPAEPSEQEFRLVLRSGIILCNAINKVQSGAVPKVVESPVDSALIPNGAPLSAYQYFENVRNFMVAVQEIGLPTFEPSDLEQGGKSSRIVNCVLALKSYCEWKQNGANGAWKFGGNPKPNISAKSFVRKNSDPFTNSLSRTSSINEKTLATLNSDVESSKMSGSLSLSMLVHSILSDKKPEEIPMLVESVLNKVVEEFEHRIASQGEQAKITLRDHVSQRNGSASKFDKKVENKIHMVAKKEDIHKNRVAAEELQTKHLNQKMLFDQQQRDIQELKLTLHTTKAGMQFMQMKFRDEFSNLGMHIHGLAKAASGYHRVLEENRKLYNEVQDLKGSIRVYCRIRPFFPGQPNQLSAVENIEDGTITVSIPSRNGKGQRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQEIHSSSHKGLSVPDASLVPVSSTIDVIELMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLASGATIRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAHKNSHIPYRNSKLTQLLQDSLVAGFISGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDGANVKELKEQIASLKAALARKEGESEHSFSGSSEKYRTKTELSPYHLNQRVVDSGDRFGYRRPMVEVGNIELQSKTILRQKTKSIDFDEISVNSPPWPPVNSLGPNDGEDEKETGSGEWVDKVMVNKLEANKTDNNLLDCWQESNVNLSEAFYQTYLQDSSKMYSEQSYNMFMGGNQFNSIMASDDNMDEIDAATSDSSEPDLLWQFNHSKLTGLTNGIGSKTIMKSVSKPTKSPQLSKSSVHTSLGPSPSLKQSKVVSHKTGRSPAPVDMKRKIGGRK 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6589g00003 962 ProSiteProfiles Kinesin motor domain profile. 392 673 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00003 962 Pfam Kinesin motor domain 492 672 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00003 962 Pfam Kinesin motor domain 398 487 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00003 962 PANTHER KINESIN-LIKE PROTEIN KLP-3 494 865 IPR027640 GO:0003777|GO:0007018
Vifaun6589g00003 962 SUPERFAMILY Calponin-homology domain, CH-domain 39 169 IPR036872 -
Vifaun6589g00003 962 PRINTS Kinesin heavy chain signature 568 586 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00003 962 PRINTS Kinesin heavy chain signature 465 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00003 962 PRINTS Kinesin heavy chain signature 617 638 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00003 962 PRINTS Kinesin heavy chain signature 537 554 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00003 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 672 IPR027417 -
Vifaun6589g00003 962 Coils Coil 16 36 - -
Vifaun6589g00003 962 Coils Coil 680 707 - -
Vifaun6589g00003 962 Gene3D Kinesin motor domain 333 492 IPR036961 -
Vifaun6589g00003 962 MobiDBLite consensus disorder prediction 911 944 - -
Vifaun6589g00003 962 FunFam Kinesin-like protein KIN-14I isoform A 24 176 - -
Vifaun6589g00003 962 SMART kinesin_4 390 681 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00003 962 Pfam Calponin homology (CH) domain 39 159 IPR001715 GO:0005515
Vifaun6589g00003 962 CDD CH_AtKIN14-like 39 156 - -
Vifaun6589g00003 962 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Vifaun6589g00003 962 MobiDBLite consensus disorder prediction 911 962 - -
Vifaun6589g00003 962 FunFam Kinesin-related protein3 504 713 - -
Vifaun6589g00003 962 Gene3D - 24 175 IPR036872 -
Vifaun6589g00003 962 Gene3D Kinesin motor domain 493 714 IPR036961 -
Vifaun6589g00003 962 SMART ch_5 39 157 IPR001715 GO:0005515
Vifaun6589g00003 962 MobiDBLite consensus disorder prediction 771 799 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6589g00003 380 673 Calmodulin-binding Proteins AT5G65930 38.710 1.27e-62 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun6589g00003 K10406 - gmx:100795476 1470.29