Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6589g00002 ATGGAATCAGGAGCATTTTCAGCCGCATCTCTTGTGGAAGACGTACTTCAGCAACACGGTCATCGCCTCAAGGATCTTGATTTAGAATTTAGGAAAGCAGAAGAAGCTGCATCAAGAAGATATGAAGCGGCCGGTTGGTTGAGAAAAATTATTGGAGTTGTTGCTGCTAAGGATTTACCCGCGGAGCCATCTGAACAAGAGTTTAGGCTGGTTTTGAGAAGTGGAATTATCTTATGTAATGCTATTAATAAAGTTCAATCTGGAGCTGTTCCTAAGGTTGTGGAGAGTCCGGTTGATTCTGCGCTGATCCCGAATGGGGCACCATTATCAGCTTATCAATATTTTGAAAATGTGAGGAATTTTATGGTGGCTGTACAAGAAATTGGACTTCCTACTTTTGAGCCATCTGATCTGGAGCAAGGAGGAAAATCATCCAGGATTGTGAATTGCGTTTTGGCTCTTAAGTCGTACTGTGAATGGAAACAGAATGGTGCAAATGGTGCGTGGAAGTTTGGTGGAAATCCCAAACCTAATATTTCTGCTAAATCTTTTGTGAGAAAAAACTCGGACCCATTCACTAATTCCTTGTCAAGGACTTCTTCAATCAATGAAAAAACTCTAGCTACTCTTAATTCTGATGTCGAGTCTAGTAAAATGTCTGGTTCCCTTTCTTTGAGTATGCTTGTTCATTCTATTCTGTCAGATAAGAAGCCAGAAGAAATTCCAATGTTGGTTGAATCTGTTTTGAATAAGGTAGTTGAGGAGTTTGAACACCGTATTGCAAGCCAAGGTGAACAGGCAAAAATTACTTTAAGAGATCATGTTTCTCAAAGAAACGGATCTGCCTCAAAGTTTGATAAAAAGGTGGAGAACAAGATTCATATGGTAGCTAAGAAAGAGGACATTCATAAAAATCGTGTGGCTGCTGAGGAATTGCAAACCAAACACCTTAATCAGAAAATGCTTTTTGACCAACAGCAAAGAGACATTCAAGAACTAAAGCTTACTCTTCACACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCGTGACGAATTTTCCAATCTTGGAATGCATATTCATGGATTAGCTAAGGCTGCTTCTGGATATCATAGAGTTCTGGAAGAAAATCGCAAACTATACAATGAAGTCCAAGATCTAAAAGGAAGTATAAGGGTATATTGTCGAATAAGACCCTTCTTTCCTGGACAACCAAACCAATTGAGCGCAGTAGAAAATATAGAAGATGGAACAATCACAGTTAGTATTCCTTCGAGGAATGGGAAGGGACAAAGATCCTTCAACTTTAACAAAGTCTTTGGACCATCTGCCACCCAAGCGGAGGTATTCCTGGATATGCAACCACTTATTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACAATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGAAATTCATAGCAGCTCTCACAAAGGGCTCAGTGTGCCAGATGCCAGCCTTGTCCCAGTGTCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCACAGGAACCGTGCTGTTGGAGCAACAGCCCTTAACGACCGCAGTAGTCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGGCATCCGGAGCAACCATCCGCGGATGCATGCATTTGGTTGACTTAGCAGGAAGTGAGAGGGTGGATAAATCAGAGGCTACTGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCCTTATCAGCTTTGGGCGATGTCATAGCTTCTCTGGCTCATAAAAACTCACACATACCTTATAGAAATAGTAAACTCACACAATTGCTCCAAGATTCACTTGGAGGACAGGCCAAGACCCTGATGTTTGTTCACATAAGTCCAGAAAGTGATGCAATTGGAGAGACAATTAGTACTTTAAAATTTGCAGAAAGAGTTGCAACAGTTGAACTTGGTGCTGCGCGAGTAAACAAAGATGGTGCAAATGTTAAAGAGCTCAAAGAACAGATTGCTAGCCTTAAAGCAGCACTGGCAAGAAAAGAAGGGGAATCGGAACATTCTTTTTCTGGAAGCTCTGAAAAATATAGGACAAAGACTGAGCTATCACCATATCATTTAAACCAACGGGTTGTAGACTCGGGCGACCGGTTTGGATACAGGCGACCAATGGTTGAAGTTGGCAACATAGAGCTTCAGAGTAAAACCATATTGAGACAGAAAACTAAAAGCATTGATTTCGATGAGATATCAGTAAATTCACCACCCTGGCCCCCAGTAAATAGTCTTGGACCAAACGACGGTGAGGATGAGAAAGAAACAGGTTCCGGAGAATGGGTTGATAAGGTAATGGTAAACAAGCTAGAAGCGAACAAAACTGACAACAACCTCTTGGATTGTTGGCAAGAAAGCAATGTAAACTTATCTGAGGCCTTTTATCAAACGTATCTCCAAGATTCTTCCAAAATGTATTCAGAACAGTCCTATAATATGTTCATGGGAGGAAACCAGTTTAATAGCATTATGGCTTCAGATGATAACATGGATGAGATCGACGCTGCAACCAGTGATTCCTCAGAACCTGACTTGCTTTGGCAATTTAATCATTCTAAACTTACCGGTTTGACCAATGGAATTGGATCAAAGACTATTATGAAATCTGTCTCAAAGCCAACAAAAAGCCCACAATTAAGCAAGAGTTCTGTTCATACTTCTCTTGGTCCTTCACCTTCATTGAAACAATCAAAAGTTGTCTCACATAAGACAGGGAGAAGTCCAGCTCCTGTTGACATGAAGCGTAAAATTGGGGGTAGAAAGTAA 2871 0.4054 MESGAFSAASLVEDVLQQHGHRLKDLDLEFRKAEEAASRRYEAAGWLRKIIGVVAAKDLPAEPSEQEFRLVLRSGIILCNAINKVQSGAVPKVVESPVDSALIPNGAPLSAYQYFENVRNFMVAVQEIGLPTFEPSDLEQGGKSSRIVNCVLALKSYCEWKQNGANGAWKFGGNPKPNISAKSFVRKNSDPFTNSLSRTSSINEKTLATLNSDVESSKMSGSLSLSMLVHSILSDKKPEEIPMLVESVLNKVVEEFEHRIASQGEQAKITLRDHVSQRNGSASKFDKKVENKIHMVAKKEDIHKNRVAAEELQTKHLNQKMLFDQQQRDIQELKLTLHTTKAGMQFMQMKFRDEFSNLGMHIHGLAKAASGYHRVLEENRKLYNEVQDLKGSIRVYCRIRPFFPGQPNQLSAVENIEDGTITVSIPSRNGKGQRSFNFNKVFGPSATQAEVFLDMQPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQEIHSSSHKGLSVPDASLVPVSSTIDVIELMNLGHRNRAVGATALNDRSSRSHSCLTVHVQGRDLASGATIRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAHKNSHIPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDGANVKELKEQIASLKAALARKEGESEHSFSGSSEKYRTKTELSPYHLNQRVVDSGDRFGYRRPMVEVGNIELQSKTILRQKTKSIDFDEISVNSPPWPPVNSLGPNDGEDEKETGSGEWVDKVMVNKLEANKTDNNLLDCWQESNVNLSEAFYQTYLQDSSKMYSEQSYNMFMGGNQFNSIMASDDNMDEIDAATSDSSEPDLLWQFNHSKLTGLTNGIGSKTIMKSVSKPTKSPQLSKSSVHTSLGPSPSLKQSKVVSHKTGRSPAPVDMKRKIGGRK 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6589g00002 956 MobiDBLite consensus disorder prediction 905 938 - -
Vifaun6589g00002 956 Gene3D Kinesin motor domain 367 491 IPR036961 -
Vifaun6589g00002 956 Gene3D - 24 175 IPR036872 -
Vifaun6589g00002 956 PRINTS Kinesin heavy chain signature 568 586 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00002 956 PRINTS Kinesin heavy chain signature 617 638 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00002 956 PRINTS Kinesin heavy chain signature 465 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00002 956 PRINTS Kinesin heavy chain signature 537 554 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00002 956 SUPERFAMILY Calponin-homology domain, CH-domain 39 169 IPR036872 -
Vifaun6589g00002 956 Pfam Kinesin motor domain 492 666 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00002 956 Pfam Kinesin motor domain 398 487 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00002 956 FunFam Kinesin-related protein3 504 707 - -
Vifaun6589g00002 956 Pfam Calponin homology (CH) domain 39 159 IPR001715 GO:0005515
Vifaun6589g00002 956 MobiDBLite consensus disorder prediction 905 956 - -
Vifaun6589g00002 956 ProSiteProfiles Kinesin motor domain profile. 392 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00002 956 Coils Coil 16 36 - -
Vifaun6589g00002 956 MobiDBLite consensus disorder prediction 765 793 - -
Vifaun6589g00002 956 FunFam Kinesin-like protein KIN-14I isoform A 24 176 - -
Vifaun6589g00002 956 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 699 IPR027417 -
Vifaun6589g00002 956 CDD CH_AtKIN14-like 39 156 - -
Vifaun6589g00002 956 Gene3D Kinesin motor domain 492 708 IPR036961 -
Vifaun6589g00002 956 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Vifaun6589g00002 956 PANTHER KINESIN-LIKE PROTEIN KLP-3 494 859 IPR027640 GO:0003777|GO:0007018
Vifaun6589g00002 956 SMART ch_5 39 157 IPR001715 GO:0005515
Vifaun6589g00002 956 SMART kinesin_4 390 675 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vifaun6589g00002 956 Coils Coil 674 701 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6589g00002 380 667 Calmodulin-binding Proteins AT5G65930 39.403 1.08e-64 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun6589g00002 K10406 - gmx:100795476 1476.84