Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6405g00001 ATGGATCAACTGGTGGCAAAGATCAAGGCAAGCTCAACAGCGTCTGCTTACTGTGAAGATCAAGCCAAAATGAGGACCCCCTTGGACTTTTATCTCATCTTAGGTATTAAACCAGCTGATACAGCAGCTGATATCAAGAAGGCATATCACAAGGCCGCTCTCAGACATCACCCTGACAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGGGATGAAGGTCTTTTCTGGAAAGAAATTTCCCAGGAGGTGCACAAGGATGCTGATAGACTTTTCAAAATGATTGGAGAGGCATATGCTGTACTTTCAGACCCTGCCAAGCGCGCGGACTATGATATGGAAGAGGACATAAGGAAACTTTATAAACAAAGTAACAAAGGTGGCGCATGCAGGAGATCTTCAGACGTTTATGGAAATGGAAGATCATCTGATAGTTATAGATCTTCCTATGACAGAACTTATAACAGACGATATGGACATTGGAGCACATATGGAGATTCCTATTCTCGATGGTAA 516 0.4341 MDQLVAKIKASSTASAYCEDQAKMRTPLDFYLILGIKPADTAADIKKAYHKAALRHHPDKAGQLLARSEVGDEGLFWKEISQEVHKDADRLFKMIGEAYAVLSDPAKRADYDMEEDIRKLYKQSNKGGACRRSSDVYGNGRSSDSYRSSYDRTYNRRYGHWSTYGDSYSRW 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6405g00001 171 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 14 171 - -
Vifaun6405g00001 171 SMART dnaj_3 28 107 IPR001623 -
Vifaun6405g00001 171 ProSitePatterns Nt-dnaJ domain signature. 92 111 IPR018253 -
Vifaun6405g00001 171 Pfam DnaJ domain 29 112 IPR001623 -
Vifaun6405g00001 171 PRINTS DnaJ domain signature 49 64 IPR001623 -
Vifaun6405g00001 171 PRINTS DnaJ domain signature 87 107 IPR001623 -
Vifaun6405g00001 171 PRINTS DnaJ domain signature 31 49 IPR001623 -
Vifaun6405g00001 171 SUPERFAMILY Chaperone J-domain 19 111 IPR036869 -
Vifaun6405g00001 171 Gene3D DnaJ domain 13 135 IPR036869 -
Vifaun6405g00001 171 CDD DnaJ 29 104 IPR001623 -
Vifaun6405g00001 171 ProSiteProfiles dnaJ domain profile. 29 115 IPR001623 -
Vifaun6405g00001 171 MobiDBLite consensus disorder prediction 127 148 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6405g00001 31 112 C2H2 Transcription Factor Family AT1G74250 32.927 9.65e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun6405g00001 K09527 - var:108331523 223.787