Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun6195g00005 ATGGACAACGTGGTGTCTGTTTTTCCAAACACAAAGCATTATCCTTCCACGACAAAATCGTGGGACTTCATAGGCCTCCCACAAAATAGTAAAAGAATGAGTTTGGAGAGTGACATAATTGTTGGAGTATTAGACACCGGCATTTGGCCGGAATCAAAGAGCTTCACAGATGAAGGATTTGGTCCACCACCAAAAAAATGGAAGGGATCATGCCACAACTTCATTTGCAACAATAAACTAATTGGTGCGCGATACTATAATATTCAAGGTTTCTATAGTAAAAGAGACATCAAAGGTCCAAGAGATGCAAATGGGCATGGGACACACTGTGCATCCACAATTGCTGGTAACATGGTTAACAATGTAAGTCTAGAAGGGTATGCCTCAGGTACAGCACGTGGAGGAGTTCCCTCAGCACGCATTGCTGTCTACAAAGTATGTTGGGAAGCTGGTTTTTGCAATGATGTTGATATCCTTGCAGCGTTTGATGAAGCAATTGCTGATGGTGTTGATGTTCTTTCTGTTTCTCTTGGACAAAAACAAGTAACACCGTTAAATCAATATTTTCAAAACTCAATCAACATTGGAAGTTTTCATGCAATGCAAAGAGGTATATTTACTTCGAATTCTGCTAATAATTTGGGCCCTGATCTTTTCACAATGACAAACTACCCACCTTGGTTACTTTCCGTTGCTGCTAGCACTTTTGGAAGAAAGTTCGTTACAAAGGTGCAATTGGGAAATGGCGCCATTTATGAGGGATCCGCAATTAACACATTTGATCTCAAAAACAAAATGTTTCCAATAGTTTTTGCAAGAGATATACCCAATATTGCGGGTGGATTTAACAGTTCGATATCAAGGTTTTGCCTTAAGGACTCTGTAGATAAACATGCAGTCAAGGGGAAGATTGTTTTATGTGAGAGCTTTCAGACACCTTCAGAGGCAGGATTTTTCTATGGGGCGGTTGGTGTAATAATTGGACTTGTTTCCTTTAAAGATTTGCCACCTACATTTGCTTTGCCAGCCACAGTACTTACTCAAGAAAACCTAAATGAAATACAATATTACACAAATTCAACAAGAAATCCAACTGCTACAATATTTAAGAGCGAAGAAGCGGAAGATTTGTCGTCCCCTTATGTAGCTTCATTCTCTTCAAGAGGTCCAAACCCAATTACACCAAATATTCTCAAGCCAGATATCGCCGCCCCAGGAGTTAACGTTATAGCTGCATGGACTCTGCTTGACCCAATTTCTGAATTTGAAGATGACAATAGAAGACTACCATATAATATTATGTCTGGAACATCAATGGCATGCCCTCATGCAGCTGCAGTAGCTGCATATGTTAAATCATTTCACCCCAATTGGTCTCCTGCTATGATCAAGTCTGCACTTATGACCACTGCAACACCAATGAGCCCATCTATAAATCCTGAAGCGGAATTTGCATATGGTGCGGGGCTAATTAGTCCTGTTAAGGCAACAAATCCAGGTTTAGTATATGATATAAGTGAAGCAGATTATGTGGAGTTCTTGTGCGGAGAAGGATACAGAGATAAACAACTAGTAAATCTTACTCGTTATAAGAGTGATTGCAAGGGAAAAGCTAATGGGAAAGCTGTATACAAATTGAACCTCCCATCATTTGCACTTGAAGTAAACGACACATTTTCGGGATATGTTTACCATAGAACCGTTACAAATGTGGGATCAGCAAAGTCTACTTATAAAGCAAGAGTAATATCTTCTCCTTTGTTGGAAATTCAAGTGAAACCCGATGTTCTGTCTTTTACATCTATAGGACAGAAAAAATCATTCTCGCTCACGATAGAAGGAGACGTCAATGTGGGAATAATGTCTTCTTCTTTGATATGGGATGATGGCAAATATCAAGTTAGAAGCCCTATTGTAGTGTATGGGAGCTAA 1932 0.396 MDNVVSVFPNTKHYPSTTKSWDFIGLPQNSKRMSLESDIIVGVLDTGIWPESKSFTDEGFGPPPKKWKGSCHNFICNNKLIGARYYNIQGFYSKRDIKGPRDANGHGTHCASTIAGNMVNNVSLEGYASGTARGGVPSARIAVYKVCWEAGFCNDVDILAAFDEAIADGVDVLSVSLGQKQVTPLNQYFQNSINIGSFHAMQRGIFTSNSANNLGPDLFTMTNYPPWLLSVAASTFGRKFVTKVQLGNGAIYEGSAINTFDLKNKMFPIVFARDIPNIAGGFNSSISRFCLKDSVDKHAVKGKIVLCESFQTPSEAGFFYGAVGVIIGLVSFKDLPPTFALPATVLTQENLNEIQYYTNSTRNPTATIFKSEEAEDLSSPYVASFSSRGPNPITPNILKPDIAAPGVNVIAAWTLLDPISEFEDDNRRLPYNIMSGTSMACPHAAAVAAYVKSFHPNWSPAMIKSALMTTATPMSPSINPEAEFAYGAGLISPVKATNPGLVYDISEADYVEFLCGEGYRDKQLVNLTRYKSDCKGKANGKAVYKLNLPSFALEVNDTFSGYVYHRTVTNVGSAKSTYKARVISSPLLEIQVKPDVLSFTSIGQKKSFSLTIEGDVNVGIMSSSLIWDDGKYQVRSPIVVYGS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun6195g00005 643 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 640 IPR045051 -
Vifaun6195g00005 643 FunFam Subtilisin-like protease SBT1.5 38 248 - -
Vifaun6195g00005 643 ProSitePatterns Serine proteases, subtilase family, histidine active site. 106 116 IPR022398 -
Vifaun6195g00005 643 ProSitePatterns Serine proteases, subtilase family, serine active site. 436 446 IPR023828 -
Vifaun6195g00005 643 Gene3D - 514 642 - -
Vifaun6195g00005 643 SUPERFAMILY Subtilisin-like 20 498 IPR036852 GO:0004252|GO:0006508
Vifaun6195g00005 643 Gene3D Peptidase S8/S53 domain 38 510 IPR036852 GO:0004252|GO:0006508
Vifaun6195g00005 643 PRINTS Subtilisin serine protease family (S8) signature 36 55 IPR015500 -
Vifaun6195g00005 643 PRINTS Subtilisin serine protease family (S8) signature 435 451 IPR015500 -
Vifaun6195g00005 643 PRINTS Subtilisin serine protease family (S8) signature 102 115 IPR015500 -
Vifaun6195g00005 643 Pfam Fibronectin type-III domain 546 640 IPR041469 -
Vifaun6195g00005 643 Gene3D - 237 375 - -
Vifaun6195g00005 643 ProSiteProfiles Serine proteases, subtilase domain profile. 20 497 - -
Vifaun6195g00005 643 CDD Peptidases_S8_3 13 472 IPR034197 -
Vifaun6195g00005 643 Pfam Subtilase family 37 489 IPR000209 GO:0006508|GO:0008236
Vifaun6195g00005 643 CDD PA_subtilisin_like 244 368 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun6195g00005 1 641 Subtilisin-like Serine Gene Family AT5G59190 49.693 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun6195g00005 - - gmx:100815516 885.56