Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun5925g00003 ATGAACAAAATAAAACAATCCCTCGCCGGAATCTCAAACTCCGGCAACAACAAAAAAAAACTCATCTACACCCTTTTCACATCGCTTCTCATAATAACCACCATTGTAGCCATTGTCGCTGCAACAACAACCAAAAACTCAAACAAAACCAAAACCAACAAAATCACTTCATCTTCTCTCTCACTCTCTCACCATTCTCACACCATTATCAAATCCGCTTGCACCACCACACTCTACCCTGAACTTTGCTTCTCCGCCATTTCCTCTGAACCAAACGTAACTCACAGAATCTCCAACCACAAAGACGTTATCTCAGTCTCTCTCAACATCACAGCCAGAGCGGTAGAACATAACTTCTTCACCGTGAAAAACCTCATCACGTTGAAAAACCTCACCAAGAGAGAGAAAACCGCTCTTCATGATTGTTTAGAAACCATTGATGAAACACTGGACGAACTCAAAGAAGCTGAGAATGATCTTGCTCTGTATCCAGCCAAAAAGACAGTATATCAACACGCTGATGATCTGAAAACCCTCATAAGCGCCGCCATTACCAACCAGGTGACTTGCTTGGACGGTTTCTCGCACGACGGTGCTGATAAGAGAGTGAGGAAGGTTCTAGAAGAAGGACAAGTGCACGTGGAACATATGTGTAGTAATGCATTAGCCATGACGAAGAACATGACAGATTCAGACATAGCAGAATTTGAACAGACTAATGTGTTGAAAAGTGAAAGAAATGGTAGAAAATTATTGGAGGAGGAGAATGGAGTGAGGTGGCCGGAGTGGATATCGACCGGAGACAGGAGGCTGCTGCAAGGGGGAGAGGTGAAGGCGGATGTGGTGGTGGCGGCGGATGGGAGTGGAGACTTTAAGACGGTGACGGAGGCTGTTGCGGCTGCTCCTTTGAAAAGTAGTAAGAGATTTGTGATAAAGATAAAAAGTGGGGTGTATAAAGAAAATGTGGAGGTGCCAAAGAAGAAGATTAATATAATGTTTTTGGGAGACGGTAAAACTAGTACTTTTATTACTGGTGATAGAAATGTTGTTGATGGAAGCACTACCTTTCACTCTGCTACTGTTGCCATAGTAGGAGCAAATTTTCTAGCAAAAGACATAACATTCCAAAACACAGCCGGTCCAGCAAAGCACCAAGCAGTAGCCCTAAGAGTTGGTGCAGACCTCTCAGCCTTCTACAACTGCGACATCATAGCCTACCAAGACACACTCTACGTCCACAACAACAGACAATTCTTCGTCAACTGTTTCATTTCCGGAACCGTCGACTTTATCTTCGGCAACGCCGCCGTCGTCTTCCAGAACTGCGACATTCATGCAAGACGTCCAGACTCCGGACAGAAAAACATGGTCACTGCACAAGGTAGAGTTGATCCCAACCAAAACACTGGCATTGTGATACAGAAATGTAGGATAGGTGCAACTAAGGATTTAGAGGGTGTGAAGAGTAGTTTTCCTACTTATCTTGGAAGGCCTTGGAAGGAATACTCTAGGACAGTGATCATGCAGAGTGTTATTGGTGATGTTATTGAACCTGTTGGATGGCATGAATGGAATGGGAATTTTGCTTTGGATAGTTTGGTTTATAGGGAATATTTGAATACTGGACCTGGTTCTGGGACCTCTAAGAGGGTGACATGGAAAGGGTTTAAGGTTATTAGTAATGTTGCTGAGGCACAAAGTTTTACTGCTGGGAATTTTATTGGCGGGTCTAGTTGGTTGAGCTCTACTGGGTTTCCTTTCTCTCTTGGGCTTTGA 1776 0.4398 MNKIKQSLAGISNSGNNKKKLIYTLFTSLLIITTIVAIVAATTTKNSNKTKTNKITSSSLSLSHHSHTIIKSACTTTLYPELCFSAISSEPNVTHRISNHKDVISVSLNITARAVEHNFFTVKNLITLKNLTKREKTALHDCLETIDETLDELKEAENDLALYPAKKTVYQHADDLKTLISAAITNQVTCLDGFSHDGADKRVRKVLEEGQVHVEHMCSNALAMTKNMTDSDIAEFEQTNVLKSERNGRKLLEEENGVRWPEWISTGDRRLLQGGEVKADVVVAADGSGDFKTVTEAVAAAPLKSSKRFVIKIKSGVYKENVEVPKKKINIMFLGDGKTSTFITGDRNVVDGSTTFHSATVAIVGANFLAKDITFQNTAGPAKHQAVALRVGADLSAFYNCDIIAYQDTLYVHNNRQFFVNCFISGTVDFIFGNAAVVFQNCDIHARRPDSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEGVKSSFPTYLGRPWKEYSRTVIMQSVIGDVIEPVGWHEWNGNFALDSLVYREYLNTGPGSGTSKRVTWKGFKVISNVAEAQSFTAGNFIGGSSWLSSTGFPFSLGL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun5925g00003 591 Pfam Plant invertase/pectin methylesterase inhibitor 69 224 IPR006501 GO:0004857
Vifaun5925g00003 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 63 229 IPR035513 -
Vifaun5925g00003 591 Pfam Pectinesterase 280 576 IPR000070 GO:0030599|GO:0042545
Vifaun5925g00003 591 Gene3D - 274 591 IPR012334 -
Vifaun5925g00003 591 FunFam Pectinesterase 274 591 - -
Vifaun5925g00003 591 SUPERFAMILY Pectin lyase-like 277 590 IPR011050 -
Vifaun5925g00003 591 FunFam Pectinesterase 66 229 - -
Vifaun5925g00003 591 NCBIfam pectinesterase inhibitor domain 58 228 IPR006501 GO:0004857
Vifaun5925g00003 591 Coils Coil 139 159 - -
Vifaun5925g00003 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 68 229 IPR035513 -
Vifaun5925g00003 591 CDD PMEI-like_3 72 229 - -
Vifaun5925g00003 591 ProSitePatterns Pectinesterase signature 2. 424 433 IPR033131 -
Vifaun5925g00003 591 SMART PMEI_2 65 224 IPR006501 GO:0004857
Vifaun5925g00003 591 PANTHER PECTINESTERASE 36 581 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun5925g00003 61 591 Carbohydrate Esterase AT3G14310 70.932 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun5925g00003 K01051 - gmx:100776623 893.264