Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun5770g00003 ATGGCTTCCACATTTCTCACCTTACCAACTCCTTTCCTTCACAAATCAACCGCCGCTTCTTTCTCCAACCCGAAACTCCCACTTTTCAAGAGGGACTCTTTGAAGATTAACGCAATTTCCAAGCAATGGGAACCAACTAAGGTCGTGCCTCAGGCTGATAGGGTTCTTATTCGTCTCCAGGAGCCATCACGAACAACCACTGGTGGAATTTTGTTGCCCGGGTCAGCTGTTAAATTTGAACAATATCTTACTGGGGAAGTCCTAAGTGTTGGTGCTGAGGCTGAAAATGTAAAGGCTGGAGCAAAGGTACTATTCACTGATATGAGTGCTTATGAGGTGGATTTGGGGACTGAAGCGAAGCACTGCTTTTGTAAATCAAGTGACTTGCTGGCCGTGGTTGAGTAG 405 0.4617 MASTFLTLPTPFLHKSTAASFSNPKLPLFKRDSLKINAISKQWEPTKVVPQADRVLIRLQEPSRTTTGGILLPGSAVKFEQYLTGEVLSVGAEAENVKAGAKVLFTDMSAYEVDLGTEAKHCFCKSSDLLAVVE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun5770g00003 134 Gene3D GroES chaperonin 43 134 IPR037124 GO:0006457
Vifaun5770g00003 134 SUPERFAMILY GroES-like 47 134 IPR011032 -
Vifaun5770g00003 134 PANTHER 10 KDA HEAT SHOCK PROTEIN 46 132 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vifaun5770g00003 134 FunFam 10 kDa chaperonin 43 134 - -
Vifaun5770g00003 134 CDD cpn10 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vifaun5770g00003 134 SMART Cpn10_2 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
Vifaun5770g00003 134 Pfam Chaperonin 10 Kd subunit 47 133 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun5770g00003 46 134 Calmodulin-binding Proteins AT5G20720 32.990 1.60e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun5770g00003 K04078 - gmx:100306026 206.068