Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun5624g00001 ATGGCGAGTTTCTTGCTTGACTTGGCGAAGTCATGTGTGGAGAAACTGATCAATGCAGCGATTGTGGAATCAAGTTATATTTGTTGCTTCACATGCATTGCTAAAGATTTCGAAGAAGAAAAATCTAGATTGAAAATAGAAAGGGAAACTTTTGAGCGACACATTGAAGAGGCAACAAGAAGAGGGGAAGAAGTTCAACCCGATGCACTTGCTTGGAAAGATGAAGTTGATGAGCTCATTCACGAAGATACAAAAAAAGAACAAAAATTCTTTTTTGAACTTTGTCCTCATTGCTTATGGAGATATAATAGAGGAAAATCACTAGCAAAGAAAAAGGAGCGAATTAAAATATCGATAGAAACAAGAAAGGAACTTACAGTTGGACTCCCTGCTCATCTTCCCGATATTGAACGATGGACGATCAAACACTATGTGCATCTTAAAAGCAGAGAATCTCAATACACAAAGCTTTTGGTTGAACTCAAAGATGACAACAATTATATAATTGGGTTGCATGGAATGGGGGGAACAGGAAAAACTACATTGATCAAGAAAGTAGGTAAAGAACTTAAGCAATCAAAACAATTTACTCATGTCATTGATACGACAGTGTCATTTTCTCCCAATATTAAAAAGATTCAGGATGATATTGCCGGGCCTTTGGGATTGAAATTTGATGACTGTAATGATGTAGATCGACCCAAAAAACTATGGCGCAGATTAACCAATGGTGAGAAGATTCTTCTAATATTGGATGACGTGTGGGGCGATGTCAATTTTTATGAAATTGGAATTCCAGGAAGTGACAATCACAAAGGTTGTAGGATTATTGTAACCACGCGCAATCAGTCGGTGTGCGACAAATTAGGGTGCCAAAAGACAATCCAACTAGATCTCTTATCTGAAGAAGATGCGTGGATCATGTTTAAAAAGTATGCTGATCTAAGTGAAACCTCGAAGAAATTTTTTCTTGTCAAGGGCCGTCAAATTGCAAATGAATGCAAAAACCTACCTATTGCAATTGTTGTTATCGCTAGTAGTTTGAAGGGCAAACAACATCAGGATGAATGGGAAATGGCCTTAAAATATTTGAAAAACAACATCTCCAAGCACAACGACGATGATGACGTTGTTGAAATTTATAAATGCTTGAAGTTTAGCTATGATAAGTTGAATGAACAGGATAAGAGCCTATTCCTTTTGTGTTCTGTATTCCGAGAAGATGAAGATATTCATACTGAAAGTTTAGCTAGACTTGCCATCGGAGGAGGTCTTTTTGGGGAAGATAGTGGCAGCTACGAAGAAGCTCGAAGTCGAGTAGTTATATCCAAAAACAAACTCCTAGATTCTTGTTTATTGTTGGAGGGCGGTCAAAGTAGTGTAAAAATGCATGACTTCGCTCGTGATGCAGCCCAATGGATAGCGAACAAAGAGATTCAAACAAGAAAAGTATATGACAAACATCAAAAGGCTATGCTTGAAAGGGAGAAAAATATTAAATATTTGTTATGTGAAGGCAAGCCAGAGGAGGTGTTTTCTTGTAAATTTGATGGTTCCAAGGTGGAGATTCTAATTGTCATCATTGATACGTGTTACCACTTGCGTGATGGAGTAGTTGTCCCAGATTCATTTTTTGAAAATAGTACAAGCTTGAGAGTTTTTCATTTACGTGGTGATGATATCATGATATCATTACCTAATTCAATGCAAAAGTTGAAGAATATACGATCTCTTATATTTACAGATTGTAGTTTGGGTGACATCTCTATCTTTGGAAGTCTGCAAAGTCTTGAGGAACTTGATTTGGATCATTGTAACATTGATGAAATGCCTAATGGAATTACAGAACTAAAGAGATTTAGATTGTTGAAAATGAAATGGTGTTCAATTTTCAGGACTAATCCATTTGAAGTGATTAAAAGATGCTCATCACTTCAAGAGTTGTATTTCATATATGACAATAGATTTTTTTTTAGAGAAATAACTTTTCCTAAATTGCAAAGGTTTCATGTAAGTGACAGTGAAACTGATTCTTCAATATCAAAGTATGTGTCTATTGAAAGGGATGATGAAGAATTCCTATCTGAAACAACACTTAAGTATTGTATGCAAGAAGCAGAGGTTCTTAGACTAAGAAGAATTGAGGGGGAATGGAGAAACATCATACCTGATATTGTTCATATGGATCAAGGCATGAATAATCTAGTTGAGCTAGTCTTAAGTTCCATTTCACAACTAAAGTTCCTCATTTACACTGAGCATACTCATTCTCAAGCATCAAATGTCTTCTCCAAGTTGGTTGTACTACATTTGAGTTATATGGAAAATTTGGAAGAATTGTGTAAAGGTTCTCTTTCCGTTGACTCTTTTAAGAGTTTAGAGAGTTTATCTATAATAAAGAATTGCAAACACTTACGAAGCTTATCAGGGATTGCAAACCAATGCAATCTAAAGAGCGTGTCACTAGAGAGTTGCCCGATGTTAATCTCCCTATTTGAAGTGTCAACTTCTGGTAGCCTAGTGTTGTTGGAGATATTGGAAGTAATTGATTGTAAGAATCTTGAAGACTTAATAACACATGAAAGAAAAGGGGAAGGATCCAAAAGGGAAATATTTGAGAGCAATGGTAGCAATCTAATGTTTATGAAATTACAAGTTCTTAAAATTATGGATTGCCCAAAATTTGAAATAATACTTCCGCTTATCTCTGCTCATGATCTTCCGGCACTAGAAGCCATTGAAGTGAAAAGCTGCGATAAGTTGAGATACATATTTGGTCAAGTCGTCGAATTTGTGTCCCTAAAATATATAGAGCTTTGTGGTGTACCCAATTTGATTGACATTTTCCAAGAATGTAATCGCACAACGTCTTTCTCAATTAATCGTTCATCTCCCATTTCTACATTTGCTTCCAAGCCAACTACACACCCGAAGCCTATCAAATGCAGCATCTTGTCATGGACTGATATGTATTGTTGTGGTAAGGAAAAGAAGAACAAATTGAGGAGTACCACAAGTACTAGAATTCCATTGAGTTATGAGAATCAACAGCATACAAACTTAATGGAATCAAATTCAAATTGTCTTAGCATAAACATATGGGAGCGTGTTCAATGTCTCTCAAGACAATCAAAGATCCTGTGCAATGTTAAAAAGATTGAGTTGACTGATTTGAGGAAGATAAAATCAGTATTTGTCCTATCTATTGCTCCAAGAATGTTGTTGGAAGTTTTGATAATTATCAGATGTGATGAATTGAAGCACATAATAATAGACACAGGAGATCATGATAGTACCGGTGAAAATAACAATGGCAATGTCTTCCCAAAATTAAAAGAGCTCGTCGTTGGTGATTGTGTGGAATTAAAGTACATATTTGGACACGACACTAATGAACATCGAAACCACACTGAAAATCATCTTCATCTTTCGTCATTGGAATATGTCAATCTTTGTGAGCTGCCAAGCTTAGTTGCCATATGTCCCAAACAATATCATACAACATTGCCACTTTTGAAAAAACTTGTACTCAGAAACTGTGCATGGGCTGCTAATATAAAATCTATTGGTGATTTCATTCCTTATCATTCTATTTCAAGACGTGTCAATTGTACAACCATGAAGGGGGATTGCAATCTGATTCCTTCTATTCTGCTTCGGAGAGCTGAGTCTGCTGGACTATTGTCTGCGTTGTTGGACCCTACCGGTGTGCTGATGGGCCCTATTGGAGTGTTGCCCGGCACTGCAGATGTGCTGCTGAATTCTCCTGGTGCATCTTCTTCTTCATTCTGA 3792 0.366 MASFLLDLAKSCVEKLINAAIVESSYICCFTCIAKDFEEEKSRLKIERETFERHIEEATRRGEEVQPDALAWKDEVDELIHEDTKKEQKFFFELCPHCLWRYNRGKSLAKKKERIKISIETRKELTVGLPAHLPDIERWTIKHYVHLKSRESQYTKLLVELKDDNNYIIGLHGMGGTGKTTLIKKVGKELKQSKQFTHVIDTTVSFSPNIKKIQDDIAGPLGLKFDDCNDVDRPKKLWRRLTNGEKILLILDDVWGDVNFYEIGIPGSDNHKGCRIIVTTRNQSVCDKLGCQKTIQLDLLSEEDAWIMFKKYADLSETSKKFFLVKGRQIANECKNLPIAIVVIASSLKGKQHQDEWEMALKYLKNNISKHNDDDDVVEIYKCLKFSYDKLNEQDKSLFLLCSVFREDEDIHTESLARLAIGGGLFGEDSGSYEEARSRVVISKNKLLDSCLLLEGGQSSVKMHDFARDAAQWIANKEIQTRKVYDKHQKAMLEREKNIKYLLCEGKPEEVFSCKFDGSKVEILIVIIDTCYHLRDGVVVPDSFFENSTSLRVFHLRGDDIMISLPNSMQKLKNIRSLIFTDCSLGDISIFGSLQSLEELDLDHCNIDEMPNGITELKRFRLLKMKWCSIFRTNPFEVIKRCSSLQELYFIYDNRFFFREITFPKLQRFHVSDSETDSSISKYVSIERDDEEFLSETTLKYCMQEAEVLRLRRIEGEWRNIIPDIVHMDQGMNNLVELVLSSISQLKFLIYTEHTHSQASNVFSKLVVLHLSYMENLEELCKGSLSVDSFKSLESLSIIKNCKHLRSLSGIANQCNLKSVSLESCPMLISLFEVSTSGSLVLLEILEVIDCKNLEDLITHERKGEGSKREIFESNGSNLMFMKLQVLKIMDCPKFEIILPLISAHDLPALEAIEVKSCDKLRYIFGQVVEFVSLKYIELCGVPNLIDIFQECNRTTSFSINRSSPISTFASKPTTHPKPIKCSILSWTDMYCCGKEKKNKLRSTTSTRIPLSYENQQHTNLMESNSNCLSINIWERVQCLSRQSKILCNVKKIELTDLRKIKSVFVLSIAPRMLLEVLIIIRCDELKHIIIDTGDHDSTGENNNGNVFPKLKELVVGDCVELKYIFGHDTNEHRNHTENHLHLSSLEYVNLCELPSLVAICPKQYHTTLPLLKKLVLRNCAWAANIKSIGDFIPYHSISRRVNCTTMKGDCNLIPSILLRRAESAGLLSALLDPTGVLMGPIGVLPGTADVLLNSPGASSSSF 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun5624g00001 1263 PRINTS Disease resistance protein signature 241 255 - -
Vifaun5624g00001 1263 PRINTS Disease resistance protein signature 592 608 - -
Vifaun5624g00001 1263 PRINTS Disease resistance protein signature 168 183 - -
Vifaun5624g00001 1263 PRINTS Disease resistance protein signature 334 348 - -
Vifaun5624g00001 1263 Pfam NB-ARC domain 156 389 IPR002182 GO:0043531
Vifaun5624g00001 1263 Gene3D - 133 296 IPR027417 -
Vifaun5624g00001 1263 Gene3D Ribonuclease Inhibitor 710 989 IPR032675 -
Vifaun5624g00001 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 402 IPR027417 -
Vifaun5624g00001 1263 Coils Coil 34 61 - -
Vifaun5624g00001 1263 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 908 1179 - -
Vifaun5624g00001 1263 Gene3D Ribonuclease Inhibitor 475 688 IPR032675 -
Vifaun5624g00001 1263 SUPERFAMILY L domain-like 462 951 - -
Vifaun5624g00001 1263 FunFam Probable disease resistance protein At1g61300 133 294 - -
Vifaun5624g00001 1263 Gene3D - 299 392 IPR042197 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun5624g00001 169 579 WRKY Transcription Factor Family AT5G45050 23.832 1.71e-12 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun5624g00001 - - psat:127080586 1536.55