Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun5492g00001 ATGGCCATGTTCAAAACAACAAAACCATGGTTCTGGCTTTCTCTTCTCAACCTCATCTTCTCTTTACACTACCTTCCTTCCATTGCAGCTCTAACCACCATCTCTGCAAACCAATCTCTCTCTGCTGACCAAACTCTAGTCTCTGAAGGTGGAAGATTTGAACTAGGTTTCTTCAAACCAGGTAATAATTCCTCTAAGTACTACATAGGAATATGGTACAAAAAGGTTAGCCAACAAACAATTGTTTGGGTTGCCAACAGAGACAATCCTGTCTCTGACAAAAGCACTGCCACCTTAAAAATTTCAGCTGGTAATTTAGTTCTATTAGATGAGTATTCAAACCAAGTTTGGTCAACAAACACGAGTTTTCCTAACTCAGATTCTGTTGTAGCTATTCTTCTAGACAGTGGAAATCTTGTTTTGAGAAATAGGCCTAATGGTGATGCATCAGATCCTCTATGGCAGAGTTTTGATCATCAGACAGATACGTTTCTTCCGGGTGGAAAAATTAAGCTGGACAAGAAAACAAAGAAGCCTCAGTTTCTTACTTCATGGAAGAATAGGGAGGATCCTTCGACTGGTCTTTTCTCTTTGGAACTTGATCCAAAAGGAACAAATTCATATCTTATTCTTTGGAATAAGTCTGAACAGTATTGGACAAGTGGAGCTTGGAATGGACAGATATTTAGTCTTGTTCCTGAGATGAGGTTAAATTACATATACAATTTTTCGTTTGTGTCGAATGAGAATGAGACCTATTTCACTTACTCGATGTATAGCGATTTAATTATATCTCGGCTTGTGATGGATATCTCGGGCATTATCAAGCAATATACGTGGTTGGAAAGTTTGAATCAGTGGAACCTGTTTTGGTCGCAGCCAAGACTACAATGTGCGGTTTATTCTTTCTGCGGTGCATTTGGGATCTGCTCTGAAAACTCGAAGCCGCTTTGTACTTGTTTGAGAGGTTTTGAGCCCAAGTCAGTGTCTGATTGGAATATGGAGGATCACTCAAGTGGGTGTATCAGAAGAACAAGTTTGCAATGCAAGGATTCCTATCCCTCTAATAGGGATAATTACGCGTTCCTTGCAATGACCAACATGGCATTACCTAAACATGCACAATCTGTGGGGTTAGGGAATGCAGAAGAATGTGAAATAACTTGCTGGAGAAACTGCTCCTGCACTGCTTATACATATGATAGTAATGGGTGTTCAATTTGGTTTGGAGACCTTGTGAATCTGCAACAATTGTCTTCTGATGATAGTAGTGGAGAAACTTTATTTATCAAACTTGCAGCATCAGAACTTCGTGATGCTAGTGAAAACAGATACCGAGGGAGGGTGACTATTGGTGCTGCTGTGGGCGCGGTTGTTGGCATAGGGATACTCTTATCCCTTCTATTGTTTTTCATCCTTAGGCGAAGAAAGAGAATGCTTGCAAAAGGAAAACTCTTGGAGGGTTTTATGGTGGAATTTGAGTACAAGGATTTGCAAAACGCGACAAAGAATTTCTCAGAGAAAATGGGAGGAGAAGGAGGTTTTGGTTCGGTTTTCAAAGGAGCTTTAGCTGATTCAAGTGTTGTAGCAGTGAAGAAGCTAGAGGGTGTTAGCAAAGGAGAGAAGAAGTTCAGAACAAAAGTGAGTATAATAGGGACAATGCAGCATGTTAATCTCGTTCGCCTCCGTGGATTCTGTTCAGAAAGTACAACCAAAAGGTTTCTGATTTATGATTACATGCCAAATCTTTCCTTGGATTTCAAGTTATTTGGAAACAACAATTCCGAGGTGTTGGGATGGAAAATGAGATACCAAATTGCTCTTGGAATTGCAAGGGGACTAATTTACCTTCATGAGAAATGCGAAGAATGTATCATACATGGTGATATAAAGCCGGAAAACATTCTCCTTGACGCTGATTTTAGTCCAAAAGTTTCCGACTTTGGCCTAGCCAAGCTAATCGGACGGGATTTCAGCAGAATCCTTACAACCATGAGAGGAACAAGAGGCTATCTTGCCCCAGAATTGTTATCTCGGGCTGCTATCACAGCCAAAGCCGATGTTTACAGCTACGGAATGATGCTTTTTGAGGTTGTGTCAGGTAGGAGGAACTCCGATCCGTCTCCCGATGGCGAAGCTATTTTCTTTCCTACCTTGGCTGCAAAAGTAGTTAACGAAGGTGGTAATGTCCTAACCCTTTTGGACCCTAAGTTGGAGGGAAATGCTGAGATTGTAGAGGTTAATCAAATGATAATAGTTGCTTCTTGGTGTGTTCAAGAAAATGAAACTCAGAGGCCAACGATGCGTCAGGTACTTCAAATTCTTGAGGGGATTTTGGATGTGAATGTGCCACCAATTCCAAGATTCAATCAAGTGTTTGTAGATAACTAA 2391 0.4082 MAMFKTTKPWFWLSLLNLIFSLHYLPSIAALTTISANQSLSADQTLVSEGGRFELGFFKPGNNSSKYYIGIWYKKVSQQTIVWVANRDNPVSDKSTATLKISAGNLVLLDEYSNQVWSTNTSFPNSDSVVAILLDSGNLVLRNRPNGDASDPLWQSFDHQTDTFLPGGKIKLDKKTKKPQFLTSWKNREDPSTGLFSLELDPKGTNSYLILWNKSEQYWTSGAWNGQIFSLVPEMRLNYIYNFSFVSNENETYFTYSMYSDLIISRLVMDISGIIKQYTWLESLNQWNLFWSQPRLQCAVYSFCGAFGICSENSKPLCTCLRGFEPKSVSDWNMEDHSSGCIRRTSLQCKDSYPSNRDNYAFLAMTNMALPKHAQSVGLGNAEECEITCWRNCSCTAYTYDSNGCSIWFGDLVNLQQLSSDDSSGETLFIKLAASELRDASENRYRGRVTIGAAVGAVVGIGILLSLLLFFILRRRKRMLAKGKLLEGFMVEFEYKDLQNATKNFSEKMGGEGGFGSVFKGALADSSVVAVKKLEGVSKGEKKFRTKVSIIGTMQHVNLVRLRGFCSESTTKRFLIYDYMPNLSLDFKLFGNNNSEVLGWKMRYQIALGIARGLIYLHEKCEECIIHGDIKPENILLDADFSPKVSDFGLAKLIGRDFSRILTTMRGTRGYLAPELLSRAAITAKADVYSYGMMLFEVVSGRRNSDPSPDGEAIFFPTLAAKVVNEGGNVLTLLDPKLEGNAEIVEVNQMIIVASWCVQENETQRPTMRQVLQILEGILDVNVPPIPRFNQVFVDN 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun5492g00001 796 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 225 IPR036426 -
Vifaun5492g00001 796 Gene3D Phosphorylase Kinase; domain 1 470 579 - -
Vifaun5492g00001 796 Pfam D-mannose binding lectin 80 186 IPR001480 -
Vifaun5492g00001 796 FunFam Serine/threonine-protein kinase 26 157 - -
Vifaun5492g00001 796 FunFam serine/threonine-protein kinase PBS1-like 473 579 - -
Vifaun5492g00001 796 SMART blect_4 37 160 IPR001480 -
Vifaun5492g00001 796 SUPERFAMILY Protein kinase-like (PK-like) 489 776 IPR011009 -
Vifaun5492g00001 796 Pfam PAN-like domain 359 415 IPR003609 -
Vifaun5492g00001 796 SMART serkin_6 504 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun5492g00001 796 Gene3D Transferase(Phosphotransferase) domain 1 580 783 - -
Vifaun5492g00001 796 Pfam Protein kinase domain 511 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun5492g00001 796 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Vifaun5492g00001 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Vifaun5492g00001 796 CDD STKc_IRAK 511 778 - -
Vifaun5492g00001 796 PANTHER OS07G0415500 PROTEIN 16 787 - -
Vifaun5492g00001 796 PIRSF SRK 3 796 IPR024171 GO:0004674
Vifaun5492g00001 796 ProSiteProfiles PAN/Apple domain profile. 349 433 IPR003609 -
Vifaun5492g00001 796 CDD PAN_AP_plant 345 433 - -
Vifaun5492g00001 796 CDD B_lectin 37 159 IPR001480 -
Vifaun5492g00001 796 FunFam S-receptor-like kinase 5 580 784 - -
Vifaun5492g00001 796 Gene3D - 28 158 IPR036426 -
Vifaun5492g00001 796 ProSiteProfiles Bulb-type lectin domain profile. 31 154 IPR001480 -
Vifaun5492g00001 796 ProSiteProfiles Protein kinase domain profile. 504 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun5492g00001 796 SMART ntp_6 357 432 IPR003609 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun5492g00001 457 785 Receptor kinase-like Gene Family AT5G20050 41.598 1.96e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vifaun5492g00001 Pkinase 8.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun5492g00001 - - psat:127086809 1345.49