LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifaun5479g00001	ATGTTTCTTGACATTGCATTCTTTTTCAAAGATGAAAACAAAGACTTGGTCACAAGGATACTAAATACCTTTGATTTCAATGCAACTAATGGAGTAGAAATCCTAGAAAATAAAGCTCTTATATCCATTTCAAACAGTAATACGATACAGATTCATGGCTTACTACAAAATATGGCATTTGATATAGCTCGACAAGAAGATAATGATCGAGGAAAGCGTCGCCGACTGAAAGATGCTAAAGACATTTGTGATTTACTTAGAAATAACAAGGGCATTGATGCAGTTGAAGGAATAATATTAGACTTGTCTCAAAATCTAGATTTAGAAGTTCAAGCTGACACATTCAACTTGATGACTGAATTAAGATTTCTGAAATTCCACGTCCCCAAAGGTAAGAAGAAATTGGGCACGGTGCATCTTTCTAAAAATTTTAAGCTATTTTTTGACAAATTGGCATACCTTGAATGGAATGGGTATCCCTTGAAGTCTCTCCCAGAACCTATTCGTGTTGAGCAGCTGATTCAGATTTGTTTGCCGCACAGCAACATTGAACATCTTTGGTTCAAGAAACAGAAACTTACGAATTTAGAGGCAATCGACCCAAGTGGGTGCAAAAAGTTGAAGAACCTCCCTGATTTGTCTGGCGCGCCAAAACTCAAACAGTTGAGCCTTTCTGGTTGTGAAGAATTACTTGAAGTTCAGGCTTCTGCTTTTTCTAAGGACACACTTGTTACTTTGCTACTGGATGGGTGCAAAAAAGTGCCAAGTCTTATGGGTGAGAAGCATTTAAAATCTCTAGCAAACTTCAGTGTCAAAGGTTGTTATGGTCTGAAGGAATTTTCATTATCTTCGGATGCACTAAGAAGGTTGGATTTGAGCAATACAGGAATCGAAATATTGCACCCATCAATTGGTGGTATGACCAAGCTTTATTCGTTAAATCTAGAAGGTTTAAATCTAACAAGTCTACCGATTGAATTGTCTTACTTGGCACTTACTGAACTTCGGGTTTCTAAGTGCAGTGTAGTAACCAAATCAAAGTTAAAAGCCCTATTTGATGGTCTGAGCTCACTAAGATTACTACACTTGAAAGACTGTGGTAACTTGTTTGAACTCCCTGCAAACATTAGTTCTTTATCATCATTGCAAGAGTTAAGACTAGATGGAAGCAATGTGAAGGAGTTGCCTGCTAGCATCAAAGACCTCTTAGAGCTAGAAGTTCAGTCTTTAGACAATTGCAGTAAGCTTCAATGTCTGCCAGAACTGCCTTTAAGCATCAAAGAGTTTCAGGCTGGCAACTGCTTGTCGTTAACGACAGTATCCACTTTGAAGACTTTTTCAGTAAACATGATTGGACAGAACAAATACATTTCGATAACGAATAGCATTAAGATGAAACTGGATGGACCCTCCCTTGCCTGCATGACGGAAGATGCCATGTTAACAATGAAAAGTGCTGCCTTTCACAATGTATTAGTGAGAAAGTACAGATTCCAAACCCACAGCTACAATTATAACAGCGCCGAGGTATGTCTGCCAGGACACAGAATTCCAAGTCAGTTCAAACAACGATCCACCACATACGCCTCCTTAACTATTGACGTTCTCAACTGGGTGGGCTTCATTTTAGCAGTTGTTGTTATTCCATCTAACATAACACAAGAGGGTGAATACTTTGTTGGAATCCTATGTCAGTGCTATTCGGAAGATGGAAGGACGGAAGTGGGAAATAAGTCTAAGTGGAAGCCTAAACTGGTTACAGATTTGGAAATGGATCATATTTTTGTATGGTATGATCCATTCCTTTGTGACACCATACTCAGAAGGAATGAAAGAAAGGTTTCTTTTAAATTCTATATTACAACTTATACAACTAGTGGCAGAGAACTTGGTGACCTTTTAAAAATCAAAGAGTGTGGGGTTTGTCCAATTTACTACTCAGAAAGTCAGAAGGTTTTAGGCACAGGGAATTTAGACAAGGACTTGGAAAAAGAGTTGTATCAGGAAATTGAACATGAGAGATCAGTTGAAGGCTATGATGAGGGAGAAGGCATTGATATTGAACCAAATGACAAGGAAGGCACGAGCATACAGAACCAAGAGTTGGACTGTTTAATCGTCTCTAAAGATACTCAGGTACATGACGATCCTCAAGAGAAAGTAAATTTGAAAGATGATGATAATTCCAAAGAATTGATGAAATCTGAGATTCTTCATTATAGTACTTCTTTGAAGTCTGGAGAGGAAGATTCTACTGAAGGAAGTTCTGATGCAAAATTGTCAATCAATAAAGAAATTAAGAGAGACGACTCTTCTGGTGTTGATGAATCACACTCTTCTACTTTTCCAACAAGATTGAGTTTAACAAACAAGTTGAAGATATACGAGGAAACTAAAAATCTTAAACCATCACTACCATCATTAGTGAAGATTCCATCTCCTTCTTATACTAATTTGTTACAACTACAAGAAGCTCCCAGCAAACTAATCCCAAACTCCTCAATGGATGCTGAAAGTTCTTCAAGTAAACCTTCTTCTTCAAAGGGTCAAATAAGAACTGAAGAAAACTCTTCAAAATTAAAGAAATTGAGTACTCAAGAACATTCTCCTGTCGATTATTCTGAATACAAGAAAACTCTTGAAGAAGACCCTTGGGCAATCATAGAGAAACTCTTATGTGATGAACATGGTAGTACTTCACAGGCTTCTCAATCTACAACACAAGCAGAATCTACTGAAACTCCGAACGAGTCAATCGAGAAGCTGCTTGATGAATTACGAGAATTGGCATTTTCTAAGAACTTATTGAAAAATTTAAGCAATGATGTGACCCTTGAAGAAGAGGTAAAAGCTTTATTAGTTAAACTCAATGATAGAGCTAATGAGCTTTCTGTGAAACAAAATTCTGGTATTACTGATTTCACCACATTCTTTAATAAATCCACGGTCAATATTGATGAAGAAAAACGGAGCAATGTTACTCTTCAACAACTTAATGTGGACGATGCAGATTCAAGAGCCAAGCTTCAAGAATCTCAAAACAAAATAAAGAAGTTCAAAGAGTCCATCGTTGCTGGTGAGGATAAGATTAAGGGGGCCGGAGTGCGTCGATATTGTGCTGTTGCAGAAGCAGTTGAGTTGTCGCTCGCGGTCGCCGGCGTGTCGTCGGAGGCCAGTCAAATAATGGATTTGGAATGA	3198	0.3802	MFLDIAFFFKDENKDLVTRILNTFDFNATNGVEILENKALISISNSNTIQIHGLLQNMAFDIARQEDNDRGKRRRLKDAKDICDLLRNNKGIDAVEGIILDLSQNLDLEVQADTFNLMTELRFLKFHVPKGKKKLGTVHLSKNFKLFFDKLAYLEWNGYPLKSLPEPIRVEQLIQICLPHSNIEHLWFKKQKLTNLEAIDPSGCKKLKNLPDLSGAPKLKQLSLSGCEELLEVQASAFSKDTLVTLLLDGCKKVPSLMGEKHLKSLANFSVKGCYGLKEFSLSSDALRRLDLSNTGIEILHPSIGGMTKLYSLNLEGLNLTSLPIELSYLALTELRVSKCSVVTKSKLKALFDGLSSLRLLHLKDCGNLFELPANISSLSSLQELRLDGSNVKELPASIKDLLELEVQSLDNCSKLQCLPELPLSIKEFQAGNCLSLTTVSTLKTFSVNMIGQNKYISITNSIKMKLDGPSLACMTEDAMLTMKSAAFHNVLVRKYRFQTHSYNYNSAEVCLPGHRIPSQFKQRSTTYASLTIDVLNWVGFILAVVVIPSNITQEGEYFVGILCQCYSEDGRTEVGNKSKWKPKLVTDLEMDHIFVWYDPFLCDTILRRNERKVSFKFYITTYTTSGRELGDLLKIKECGVCPIYYSESQKVLGTGNLDKDLEKELYQEIEHERSVEGYDEGEGIDIEPNDKEGTSIQNQELDCLIVSKDTQVHDDPQEKVNLKDDDNSKELMKSEILHYSTSLKSGEEDSTEGSSDAKLSINKEIKRDDSSGVDESHSSTFPTRLSLTNKLKIYEETKNLKPSLPSLVKIPSPSYTNLLQLQEAPSKLIPNSSMDAESSSSKPSSSKGQIRTEENSSKLKKLSTQEHSPVDYSEYKKTLEEDPWAIIEKLLCDEHGSTSQASQSTTQAESTETPNESIEKLLDELRELAFSKNLLKNLSNDVTLEEEVKALLVKLNDRANELSVKQNSGITDFTTFFNKSTVNIDEEKRSNVTLQQLNVDDADSRAKLQESQNKIKKFKESIVAGEDKIKGAGVRRYCAVAEAVELSLAVAGVSSEASQIMDLE	1065

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifaun5479g00001	1065	Gene3D	Ribonuclease Inhibitor	265	464	IPR032675	-
	Vifaun5479g00001	1065	MobiDBLite	consensus disorder prediction	830	875	-	-
	Vifaun5479g00001	1065	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	285	434	IPR044974	GO:0006952
	Vifaun5479g00001	1065	MobiDBLite	consensus disorder prediction	830	853	-	-
	Vifaun5479g00001	1065	Gene3D	Ribonuclease Inhibitor	88	264	IPR032675	-
	Vifaun5479g00001	1065	MobiDBLite	consensus disorder prediction	854	875	-	-
	Vifaun5479g00001	1065	Coils	Coil	1009	1029	-	-
	Vifaun5479g00001	1065	MobiDBLite	consensus disorder prediction	750	775	-	-
	Vifaun5479g00001	1065	MobiDBLite	consensus disorder prediction	897	917	-	-
	Vifaun5479g00001	1065	SUPERFAMILY	L domain-like	99	443	-	-
	Vifaun5479g00001	1065	MobiDBLite	consensus disorder prediction	897	916	-	-
	Vifaun5479g00001	1065	MobiDBLite	consensus disorder prediction	740	782	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifaun5479g00001	1	385	WRKY Transcription Factor Family	AT4G12020	33.081	2.34e-40	160

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifaun5479g00001	-		-	cam:101489032	1276.54