Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun5230g00001 ATGATACGGTTGACACGAGTTGATAAAGAACCAGAATATGATATGGGTGGATGTGTTATTTGCAGGGAAAATGATTTCAGTGTTGATAAATTTGACGACCGAATAGTAATAATTTGTGATCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTGTGGGACATTGGGCTATGTGAGTTGGAAGAGCTTCCTAAAGAAAAGTGGTTTTATTGTGACGACTTCAGTCAAATATATGTGGCTCTACAGACTTCAGTTTCTACTGGAGCATATACTATACCCACTCCCTTGTCTGAACTAATAATCAGGAAGCACAAGGAGAGGGGGTTGTGTACCCATGAACTGATTCCTGTTATGGTCTATGGGAGAAATATTTCTGGCCAAGAATTTGGGGGAACGTATTGCATTGTTTTTATTTTGAATTCTATTGTAGTATCTATCAGGCTTCTTAGGATTTTTGGCTGCAATATTGATGAGCTTCCCCTGGTAGCTACAAGTAGAGAGTATCAAGAAAAAGGGGATGCAAAGTCAATTTGGACTAAGAAATTAGGCTTTCACAAGATGAGTGAAGATCAGTTATCCAAATATCTTAAAGAGGGTCTCTACTATTTCAAAACCATGAAAGAGCATTATGGACTCGAGCCTTCGATGGATCACTATGGTGCCATGGTTGACCTTCTCGGTCGAGCTGGAAAGCTAGTGATGCCAATGATAGTACAATTGTTTTTGTGCAAAAAGGCCATTTTTATGTTTCAAAAGATATCTTTCCACAGGTTCAAGAAGCTGTCAGCGGTAGTGTTTTTGTCCAGATGCCTAACACTTGGGTAA 822 0.3942 MIRLTRVDKEPEYDMGGCVICRENDFSVDKFDDRIVIICDQCEKEYHVGCLWDIGLCELEELPKEKWFYCDDFSQIYVALQTSVSTGAYTIPTPLSELIIRKHKERGLCTHELIPVMVYGRNISGQEFGGTYCIVFILNSIVVSIRLLRIFGCNIDELPLVATSREYQEKGDAKSIWTKKLGFHKMSEDQLSKYLKEGLYYFKTMKEHYGLEPSMDHYGAMVDLLGRAGKLVMPMIVQLFLCKKAIFMFQKISFHRFKKLSAVVFLSRCLTLG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun5230g00001 273 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Vifaun5230g00001 273 PANTHER AUTOIMMUNE REGULATOR 1 206 - -
Vifaun5230g00001 273 SUPERFAMILY FYVE/PHD zinc finger 13 71 IPR011011 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun5230g00001 1 197 PHD Transcription Factor Family AT3G53680 45.693 4.66e-69 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun5230g00001 - - tpra:123904992 316.62