Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun5157g00001 ATGGAAGTGAATCGTAGCGGCGGCGATGGTTTCAGTGAAGAAAAAGATACGCCGGAGACGACGGAGCAACAGACGTTGAACAAGTCGGAGTTTCCGTCGGAGTCACCGTCGGAGGCGGCGATGAAAGAAGAGCTTTCTGAAACGCGTTCAATGGATGTTATTCCGATGCCGAATCCGGTTCCGATGACAATGACGGTTCCTTCGGCGAAGAAACCGTCCAAGGACCGTCACACGAAGGTGGAGGGACGCGGTCGGAGAATCCGAATGCCGGCGACATGTGCCGCGAGGATCTTCCAGCTGACAAGGGAACTTGGTCATAAATCCGACGGAGAAACAATACGGTGGTTGCTTGAACAATCTGAGCCAGCTATCATTGAAGCAACCGGAACCGGCACTGTCCCAGCCATCGCTGTTTCCGTCGGCGGGACGTTAAAGATTCCGACAACATCACCGGCGAGACCAGACGGTGAAGACGCACCAAAGAAACGAAGGAGGAGAGCATCAAACAGTGAGTTTGTTGACTTGAACGAACACGCTTCAATCTGTTCAGGACTCGCACCAATAGCTCAAACTGCTTACGGCGGCGGTAGCGGTGGTCTTGTTGGTGGTGAAAATGGTGGTGGTGGTCTAGTTCCGTTATGGCCTATGGCAAGTAATGGTAATAATGGGTCTAATACAACAGGGCCATTTTTTATGTTCCCAAATTCAACTATGAATCAGCCACAGTTTTGGGCTATTCCTGCGGCACCGTTTTTCAATAGACCTATTTCAGATTTTGTTTCTACTATGCAAATGCAAAATCAAAATCAACCTTCAAATGCTAATGGTTCATCTTCATCTACTTTGGCTCCTAGTTTGAACTCAGCTTCTACATCTACTTGTTCTTCTGCGGTCACTTCTTCATCTTCTGCTGGACCTACTCAAATGCTTAGGGATTTTTCTTTGGAAGTTTATGACAAGAAAGAGTTGCAATTTATGGGTTGTTCTGGTGCAAATTTAGAGTCACCTCCCACTTCAAATTGA 1023 0.477 MEVNRSGGDGFSEEKDTPETTEQQTLNKSEFPSESPSEAAMKEELSETRSMDVIPMPNPVPMTMTVPSAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQSEPAIIEATGTGTVPAIAVSVGGTLKIPTTSPARPDGEDAPKKRRRRASNSEFVDLNEHASICSGLAPIAQTAYGGGSGGLVGGENGGGGLVPLWPMASNGNNGSNTTGPFFMFPNSTMNQPQFWAIPAAPFFNRPISDFVSTMQMQNQNQPSNANGSSSSTLAPSLNSASTSTCSSAVTSSSSAGPTQMLRDFSLEVYDKKELQFMGCSGANLESPPTSN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun5157g00001 340 MobiDBLite consensus disorder prediction 266 287 - -
Vifaun5157g00001 340 MobiDBLite consensus disorder prediction 1 58 - -
Vifaun5157g00001 340 MobiDBLite consensus disorder prediction 7 21 - -
Vifaun5157g00001 340 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 34 319 IPR005333 GO:0003700
Vifaun5157g00001 340 Pfam TCP family transcription factor 73 140 IPR017887 -
Vifaun5157g00001 340 MobiDBLite consensus disorder prediction 144 171 - -
Vifaun5157g00001 340 ProSiteProfiles TCP domain profile. 73 127 IPR017887 -
Vifaun5157g00001 340 MobiDBLite consensus disorder prediction 64 83 - -
Vifaun5157g00001 340 MobiDBLite consensus disorder prediction 155 171 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun5157g00001 65 326 TCP Transcription Factor Family AT5G51910 52.174 4.52e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vifaun5157g00001 TCP 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun5157g00001 - - psat:127091786 533.487