Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun5009g00003 ATGGCTACTCCATTTTCTCTCTTAAAAATGGAGAACATACCTAACAAAGGTAGAGGCCTCATTGCAGCACAAGATCTCAAAGCTGGCCAAATAATCCTCACCGAATCCCCTCTCCTTCTTTACTCAGCTTCACCTCTCTTCTCTCCTTCACCCTCCCTTTACTGTCACCATTGCTTCAGAACCCTACAACCTTCACAAACATTCTCATGTCCTTCTTGCTCAAACTACATATTCTGCAGCCAAAAGTGTCTCTCCTATTCCCTCAACTCCTTTCACTCTTCTTGGACATGTCAAACACTCTCTCATCTTCAAAACCCTACTTCACCTTTATCAGGAAAATATTCTGAACTCCAAGTTCAAGCTCGTTTAATAGTTGCTGCTTACACTCTTGCTATTCACACTCCTTCAAATTTCGAGACTTTACTTTCTCTTCATAGTGTTCCTAATTATGATAAAAGTGATGCTATATTTGGTGCTGCTAAGTTCATTCATTCTCTTATCTCACCTTTTTGTCCACCCCACATGAATTTTTCACCTCAACTAGCAGCTAAAATCATTGCAATAGAAAGAGCAAACTCTTTTAGCTTAATGGAACCTTATTCACCAACTGGGCCTCAAAGATCCATTAAGGCTTATGGAATTTACCCAATTACCACTATTTTTAACCATGATTGCATTCCTGATGTATGCAGGTTTGATTATGTGGAAAAGGAAGAACATAATACTGATATTGTTATTAGGTTGATTAAGGATGTTGATGCTGGAAGTGAGATATCCATAAGCTACCAAAGGATTAATAAGGATTACTCAACAAGGAAAAGAATCTTGATGGAGGACTTTGGTTTTGTTTGTGAGTGTGATAGGTGTAAGATTGAAGCAAATTGGTATGAGAATGACAACAAGAACAGTGACAGTGATCTGCCACATGTGATATTCTTGTCTAAGTTTGTCTGTGATAAGGTGAATTGTTCAGGAACTTTGGCTCCTCTCCCTCCAAAAGATGGTGAAAAATCTAATATTCTTGAGTGTAACTTCTGTGGTAATTTGAAGGTTGACTCTACTACTTAA 1068 0.382 MATPFSLLKMENIPNKGRGLIAAQDLKAGQIILTESPLLLYSASPLFSPSPSLYCHHCFRTLQPSQTFSCPSCSNYIFCSQKCLSYSLNSFHSSWTCQTLSHLQNPTSPLSGKYSELQVQARLIVAAYTLAIHTPSNFETLLSLHSVPNYDKSDAIFGAAKFIHSLISPFCPPHMNFSPQLAAKIIAIERANSFSLMEPYSPTGPQRSIKAYGIYPITTIFNHDCIPDVCRFDYVEKEEHNTDIVIRLIKDVDAGSEISISYQRINKDYSTRKRILMEDFGFVCECDRCKIEANWYENDNKNSDSDLPHVIFLSKFVCDKVNCSGTLAPLPPKDGEKSNILECNFCGNLKVDSTT 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun5009g00003 355 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 298 353 IPR044238 -
Vifaun5009g00003 355 Pfam SET domain 17 262 IPR001214 GO:0005515
Vifaun5009g00003 355 ProSiteProfiles SET domain profile. 3 263 IPR001214 GO:0005515
Vifaun5009g00003 355 Gene3D SET domain 19 290 IPR046341 -
Vifaun5009g00003 355 CDD SET_SMYD 186 289 - -
Vifaun5009g00003 355 SMART set_7 6 269 IPR001214 GO:0005515
Vifaun5009g00003 355 SUPERFAMILY SET domain 8 285 IPR046341 -
Vifaun5009g00003 355 Gene3D - 107 193 - -
Vifaun5009g00003 355 Gene3D - 54 106 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vifaun5009g00003 SET 1.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun5009g00003 - - cam:101515628 486.108