Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun5009g00002 ATGGCTGTTCCAACTTCAACCACTCTCTTAAAAATGGAGAACATACCTAACAAAGGTAGAGGCCTCATTGCAGCACAAGATCTCAAAGCTGGCCAAATAATCCTCACCGAGTCCCCTCTCCTTCTTTACTCAGCTTCACCTCTCTTCTCTGCTTCACCCTCCCTTTACTGTCACCATTGCTTCAGAACCCTACAACCTTCACAAACATTCTCATGTCCTTCTTGCTCAAGCTACCTTTTCTGCAGCCAAAAGTGTCTCTCCATTTCCCTTAACTCTTCTCACTCTTCTTGGACATGTCAAACACTCTCTCATCTTCAAAACCCCACTTCACCTTTATCAGAAAAACCATCTGAACTCCAAGTTCAAGCTCGTTTCATTGTTGCTGCTTACAATCTTGCTATCCACACCCCTTCAAATCTTCAAGCTTTACTTTCTCTTCATAGTATTCCTAATGATGATGAAACTGATGCTATATTTGGTGCTGCTAAGTTCATTCATTCTCTTATCTCACCTTTTTGTCCACCCCACATGAATTTTTCACCTCAACTAGCTGCAAAACTCATTGCAATAGAAAGAGCAAACTCTTTTTGCTTAATGGAACCTTATTCACCAAATGGCCCTCAAAGATCCATTAAGGCTTATGGAATTTACCAAAAAACTACTATTTCTAACCATGATTGTATTCCTAATGCATGCAGGTTTGATTATGTGGAAAATGGTGAGCCTGGTGATGAACATAATACTGATATTGTTATTAGGTTGATTAAGGATGTTAGTGCTGGAAGTGAGATCTGCATAAGCTACTTTAGAATTAATAAGGATTACTCAACAAGGAAAAGAATCTTGATGGAGGACTTTGGTTTTGTTTGTGAGTGTGATAGGTGTATGATTGAAGCAAGTTGGAATGAGAATGAGAACAAGAACAGTGAAAGTGATCTGCCACATGTGATATTCTTGTCCAAGTTTGTTTGTGATAAGGTGAATTGTTCAGGAACTTTGGCTCCTCTGCCTCCAAAAGATGGTGAAAAATCTAATGTTCTTGAGTGTAACTTCTGTGGTAATTTGAAAGTTGACTCTACTACTTAA 1086 0.3895 MAVPTSTTLLKMENIPNKGRGLIAAQDLKAGQIILTESPLLLYSASPLFSASPSLYCHHCFRTLQPSQTFSCPSCSSYLFCSQKCLSISLNSSHSSWTCQTLSHLQNPTSPLSEKPSELQVQARFIVAAYNLAIHTPSNLQALLSLHSIPNDDETDAIFGAAKFIHSLISPFCPPHMNFSPQLAAKLIAIERANSFCLMEPYSPNGPQRSIKAYGIYQKTTISNHDCIPNACRFDYVENGEPGDEHNTDIVIRLIKDVSAGSEICISYFRINKDYSTRKRILMEDFGFVCECDRCMIEASWNENENKNSESDLPHVIFLSKFVCDKVNCSGTLAPLPPKDGEKSNVLECNFCGNLKVDSTT 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun5009g00002 361 Gene3D - 114 195 - -
Vifaun5009g00002 361 Gene3D SET domain 21 295 IPR046341 -
Vifaun5009g00002 361 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 305 359 IPR044238 -
Vifaun5009g00002 361 ProSiteProfiles SET domain profile. 8 269 IPR001214 GO:0005515
Vifaun5009g00002 361 Pfam SET domain 19 268 IPR001214 GO:0005515
Vifaun5009g00002 361 CDD SET_SMYD 188 295 - -
Vifaun5009g00002 361 SMART set_7 8 275 IPR001214 GO:0005515
Vifaun5009g00002 361 Gene3D - 56 113 - -
Vifaun5009g00002 361 SUPERFAMILY SET domain 9 291 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vifaun5009g00002 SET 4.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun5009g00002 - - cam:101515628 488.419