Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4996g00001 ATGGCTATTGAATTATCTGAGTTGATAAAACCAATTCATTTTTTCAAGATCATAGTTACTGAAATTCTTCACCAAGAAAAGCTAATGATACCAATAAAGTTTGTGAAGAAATATGGAGAATCTTTACCAAAAGCTATATGTTTAAAGACTCCCAATGGTGAAGATTGGGAATTAAGTTTGGTAAGAAGTGATGGCAAGATATGGTTTGAAAAGGGTTGGAAAGAATTTGCAGACTATCATTCTCTATCTCATGGCCATCTTCTACTTTTCAAATATGGAAAAACTTGCTATTTTGAGGTAAGAATCTTTGATAATAGTGGTTTAGAGATAAAGTATCCTTTCAAAAGAGTTGAAGTCAATAATGAAGAAGATTGTGGAGCAAGTCAAAAGAGAAAAGCTTACTCCTCCTTTGAAATTGGAAGCACTAGTTGTGTTAAAAAACACAAAGGAAAACATGTGAATGCAGCTCATGAAAGAGCAGAATCATTCATAACACGTAATCCATCTTTTGTTGTTGTCATGTATGCATCATACGTTGAACACCATTTTGCTTTGAATATACCTTCTGAATTTGGTAGGAGACACTTTGATTTGGATAAGAAGAAGGGAGATATTTATTTTCAGGTGTTGGATAATGACAGAGTTTGGTCTGCAAAGTACTCAATCAAGAAGAGATTGGGCACTACACAAACAAAATTTGAACTCTCAAGGAAATGGAGGGACTTTGTAGAAGACAATAACTTGAAAGTCGGTGATGTTTGCAAATTTGAGCTCATTCATAGTACTAATATGACCTTTCAAGTTCACATCTTTAAAGAAACCCATTAA 828 0.3357 MAIELSELIKPIHFFKIIVTEILHQEKLMIPIKFVKKYGESLPKAICLKTPNGEDWELSLVRSDGKIWFEKGWKEFADYHSLSHGHLLLFKYGKTCYFEVRIFDNSGLEIKYPFKRVEVNNEEDCGASQKRKAYSSFEIGSTSCVKKHKGKHVNAAHERAESFITRNPSFVVVMYASYVEHHFALNIPSEFGRRHFDLDKKKGDIYFQVLDNDRVWSAKYSIKKRLGTTQTKFELSRKWRDFVEDNNLKVGDVCKFELIHSTNMTFQVHIFKETH 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4996g00001 275 ProSiteProfiles B3 DNA-binding domain profile. 170 274 IPR003340 GO:0003677
Vifaun4996g00001 275 SUPERFAMILY DNA-binding pseudobarrel domain 11 107 IPR015300 -
Vifaun4996g00001 275 PANTHER B3 DOMAIN-CONTAINING 10 268 - -
Vifaun4996g00001 275 ProSiteProfiles B3 DNA-binding domain profile. 13 106 IPR003340 GO:0003677
Vifaun4996g00001 275 Gene3D - 147 274 IPR015300 -
Vifaun4996g00001 275 CDD B3_DNA 168 272 IPR003340 GO:0003677
Vifaun4996g00001 275 Gene3D - 9 107 IPR015300 -
Vifaun4996g00001 275 Pfam B3 DNA binding domain 170 273 IPR003340 GO:0003677
Vifaun4996g00001 275 Pfam B3 DNA binding domain 14 105 IPR003340 GO:0003677
Vifaun4996g00001 275 SUPERFAMILY DNA-binding pseudobarrel domain 166 272 IPR015300 -
Vifaun4996g00001 275 CDD B3_DNA 13 104 IPR003340 GO:0003677
Vifaun4996g00001 275 SMART B3_2 14 106 IPR003340 GO:0003677
Vifaun4996g00001 275 SMART B3_2 170 274 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4996g00001 14 124 B3 DNA Binding Superfamily AT4G01580 38.739 9.31e-23 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vifaun4996g00001 B3 3.2e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4996g00001 - - psat:127131388 372.089