Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4766g00007 ATGGAAAAATTCATTATCTGCGTTCATATATTGCTATTGAGTTTACTCACTTTAGAACTCAGAGTAGAATCTGCTATTTGGCAGCAAGCTCATGCAACTTTCTATGGTGGAAGTGATGCCTCGGGAACAATGGGAGGTGCATGTGGGTATGGAAATCTGAACATAGATGGATATGGAATAAAAACAGCTGCATTGAGTACTGCTTTGTTTAATGATGGCAAATCATGTGGTGGATGCTATCAGATTGTTTGTGATGCAAGAAAGACTATAGCCAAGTATAGAGCTGGAATTGTTCCCATCTTGTATAGAAGAGTTGGGTGCAGAAGAAGTGGAAACATAAGGTTTACTATAAATGGGAGAGATTATTTTGAGCTGGTGCTTATAAGCAACATAGGTGGAGGTGGAGAGATATGGAAAGTTTGGATAAAAGGGTCAAAAAAGAATAAATGGGAATCAATGTCAATGAATTGGGGTGCTAATTGGCAGAGTCTAAGTTATCTAAATGGTCAGAGTTTATCATTTAGAGTTCAACTCAAGAATGGAAAGACTCGTACAGCTATAAACGTTGCGCCTTCCAATTGGAGTTTTGGCCAGTCTTTCAAAAGTAATGTTCAGTTTTGA 621 0.3816 MEKFIICVHILLLSLLTLELRVESAIWQQAHATFYGGSDASGTMGGACGYGNLNIDGYGIKTAALSTALFNDGKSCGGCYQIVCDARKTIAKYRAGIVPILYRRVGCRRSGNIRFTINGRDYFELVLISNIGGGGEIWKVWIKGSKKNKWESMSMNWGANWQSLSYLNGQSLSFRVQLKNGKTRTAINVAPSNWSFGQSFKSNVQF 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4766g00007 206 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Vifaun4766g00007 206 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Vifaun4766g00007 206 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Vifaun4766g00007 206 SUPERFAMILY PHL pollen allergen 109 202 IPR036749 -
Vifaun4766g00007 206 Pfam Expansin C-terminal domain 113 191 IPR007117 -
Vifaun4766g00007 206 Gene3D - 109 206 IPR036749 -
Vifaun4766g00007 206 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 122 202 IPR007117 -
Vifaun4766g00007 206 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 125 IPR007112 -
Vifaun4766g00007 206 SUPERFAMILY Barwin-like endoglucanases 26 130 IPR036908 -
Vifaun4766g00007 206 PANTHER EXPANSIN-A15 88 203 IPR002963 GO:0009664
Vifaun4766g00007 206 Gene3D - 18 92 IPR036908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4766g00007 4 206 Expansin Gene Family AT4G01630 59.761 1.53e-101 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4766g00007 - - psat:127132523 377.867