Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4737g00002 ATGGATCGACCTGCAATTGTTGTTGGGCCAGGAATGGATATGCCCATTATGCATGATAGTGATCGTTATGAACTTGTTCGCGATATCGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGATTGATGAAAATGTTCAGAGAGAAATTATAAATCATAGATCATTGAGGCATCTGAATATTGTCAGGTTTAAGGAGGTTATGTTGACTCCAACACATTTAGCGATTGTAATGGAATATGCTTCTGGAGGAGAGTTATTCGAGCGAATATGCAATGCGGGGCGATTCAGTGAAGATGAGGCGCGATTCTTCTTCCAACAACTTATATCAGGTGTTAGCTATTGTCATTCAATGCAAGTATGTCATCGCGACTTGAAATTTGTGATTTTGGATATTCAAAGTCCTCAGTACTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCCTATATAG 459 0.39 MDRPAIVVGPGMDMPIMHDSDRYELVRDIELVAVKYIERGEKIDENVQREIINHRSLRHLNIVRFKEVMLTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQVCHRDLKFVILDIQSPQYYIHNQNLQLVPLPI 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4737g00002 152 ProSiteProfiles Protein kinase domain profile. 2 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4737g00002 152 Gene3D Transferase(Phosphotransferase) domain 1 84 142 - -
Vifaun4737g00002 152 PANTHER SERINE/THREONINE KINASE 28 127 - -
Vifaun4737g00002 152 Gene3D Phosphorylase Kinase; domain 1 29 81 - -
Vifaun4737g00002 152 Pfam Protein kinase domain 29 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4737g00002 152 SUPERFAMILY Protein kinase-like (PK-like) 29 127 IPR011009 -
Vifaun4737g00002 152 SMART serkin_6 23 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4737g00002 30 127 CBL-interacting serine-threonine protein kinases AT2G26980 48.039 1.03e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vifaun4737g00002 Pkinase 9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4737g00002 K14498 - tcc:18607880 238.81