Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun465g00004 ATGGAATCTCGATTAGTTGATGGAAATGGCGGGATGGAAGATTTCGGGGATGTTGGTTTGGTTATGTCTGAAGATCAGATACATCGAGAAACATATGAAGTGGAACCAAATGATGGGTGTAGATTAATAGAAAGTTATTCCGGGAGAGAATTGGGCATCTCTTGTCATGACCTTTCTATACAGGAACCATACGAAGGCATGGAATTCATATCCGAAGATGCTGCTAAAATGTTTTACGATGAATATGCCCGACATGTAGGATTTGTTATGCGCGTGATGTCTTGTCGACGCTCAGAAAGAGATGGTAGGATTCTTGCCCGCAGGCTTGGATGTAATAAGGAGGGTCATTGTGTTAGCATACGAGGGAAACTTGGGCCAGTTCGTAAACCAAGGGCCAGCACAAGAGAAGGTTGTAAGGCAATGATTCATATCAAGTATGATAAGTCCGGAAAATGGGTGATAACAAAGTTTGTGAAAGATCATAATCATCCATTAGTAGTCTCTCCACGCGAAGCGCGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAACTTACAACAGAGCTTCGGATGAAAAAACGGTTGTGTACATAG 597 0.4221 MESRLVDGNGGMEDFGDVGLVMSEDQIHRETYEVEPNDGCRLIESYSGRELGISCHDLSIQEPYEGMEFISEDAAKMFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKLGPVRKPRASTREGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTTELRMKKRLCT 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun465g00004 198 Coils Coil 176 196 - -
Vifaun465g00004 198 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Vifaun465g00004 198 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 45 195 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifaun465g00004 FAR1 2.7e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun465g00004 - - gmx:100787741 333.569