Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun444g00002 ATGGGATCGTGTCTCTCAGGAGCTTCTTCAGCTCCTTCTCCTCATAATAATTATCATAATTCTTCTTCTTCTTCATCTTCGAGAAGAAACTATTCGCGTGATTCGAGTGCGGAAATGAGGTTGCACAGAGTTCCTGGAAGAGTTTTCTTGAATGGTTCATCTCCTTTTGCGTCGTTGTTTTGTAGACAAGGTGGCAAGGGTGTAAATCAAGATGCAATACTTCTTTGGGAGATGTTTGGTGATGCGGATGATACTGTATTTTGTGGTGTGTTTGATGGACATGGACCACATGGACATGTGGTTGCGAAGAAAGTTAGAGATTGTTATCCTTTAAAGATAATGGAGGAATGGAATTCACGTCGCCGCGGTGATGATGATGATGGTGGTAAAACTAGTAACAATAACAAGGATGATATTTTAAAGATGATGAGAGAATTGTTTTTGATGGCGTCTAAGTTTGTGGACAAAGAACTCAAACTTCATTATGCCATGGAATCTTTTGGAAGTGGGACTACAGCTGTTACATTGTTCAAGAAGGGCCAAGAACTAGTAACAGCAAACGTAGGAGACTCTAGAGCTGTTTTAGCAACCCTAGATTCAAATGGTTCTCTTAAACCACGTCAGTTGACGACCGACCTCAAACCAAATCTTCCAAGGGAACTCGAAAGAATAAGAATTTGCAAAGGAAGAGTTTTCGCTCTCAACAACGAATCAGATGTTGCTAGAGTTTGGCTACCAAAAGTCGATTCTCCAGGCCTAGCCATGTCGCGTGCTTTCGGTGACTTTTGCCTTAAGAACTTTGGACTCATATCTGTCCCTGAAGTTGCCTATCATCGCCTCAATAACCAAGATCAGTTTGTTGTCTTGGCCACAGATGGTATATGGGATGTTCTGTCTAACAAAGAAGTTGTCAACATTGTGGCATCTGCTCCACGAGCTTCTGCGGCTAAACAACTTGTTGAATCAGCTGTTCAAGCATGGAAGACGAGGCTTCCAACTTCTAAGCTTGATGATTGTTCTGCAGTTTGCCTCTTCTTTCATCCAAACACCAATAATACCCCTAAGAGAAACACTAGTACAACTGTGGGAGAGAAAGGAGTAATAGAATCACATGACAAAACAAAACAAAAGCACCAATAG 1140 0.4158 MGSCLSGASSAPSPHNNYHNSSSSSSSRRNYSRDSSAEMRLHRVPGRVFLNGSSPFASLFCRQGGKGVNQDAILLWEMFGDADDTVFCGVFDGHGPHGHVVAKKVRDCYPLKIMEEWNSRRRGDDDDGGKTSNNNKDDILKMMRELFLMASKFVDKELKLHYAMESFGSGTTAVTLFKKGQELVTANVGDSRAVLATLDSNGSLKPRQLTTDLKPNLPRELERIRICKGRVFALNNESDVARVWLPKVDSPGLAMSRAFGDFCLKNFGLISVPEVAYHRLNNQDQFVVLATDGIWDVLSNKEVVNIVASAPRASAAKQLVESAVQAWKTRLPTSKLDDCSAVCLFFHPNTNNTPKRNTSTTVGEKGVIESHDKTKQKHQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun444g00002 379 MobiDBLite consensus disorder prediction 1 36 - -
Vifaun444g00002 379 Pfam Protein phosphatase 2C 80 322 IPR001932 -
Vifaun444g00002 379 SUPERFAMILY PP2C-like 52 348 IPR036457 -
Vifaun444g00002 379 PANTHER PROTEIN PHOSPHATASE 30 344 IPR015655 GO:0004722|GO:0006470
Vifaun444g00002 379 MobiDBLite consensus disorder prediction 353 379 - -
Vifaun444g00002 379 MobiDBLite consensus disorder prediction 1 32 - -
Vifaun444g00002 379 Gene3D - 53 348 IPR036457 -
Vifaun444g00002 379 ProSiteProfiles PPM-type phosphatase domain profile. 56 346 IPR001932 -
Vifaun444g00002 379 CDD PP2Cc 56 346 IPR001932 -
Vifaun444g00002 379 SMART PP2C_4 45 344 IPR001932 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun444g00002 1 376 PP2C-type Phosphatase Gene Family AT3G02750 44.323 9.13e-121 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun444g00002 - - tpra:123883030 499.204