Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4443g00003 ATGGCGTTTTACGGTCGCGTCAAATCTGGAATCTCTCTCTGCAACAAATTAGGTCTTCTTTCTTCCCAGAGATCTACTCTTCAACGCTCTCTCATCGCGCCTTCCATTTCCCAGGCTTTCAGAAATTTTGCTGATGTGCCGGGCCAAAAGGAAACCAAAATTAAGGTTCCCATTGCAATGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTATATTGCGGCAGTGAAAGTTAATGCAGTCGACAAGGTTGACTCTGAGCTTCTTCAGTTTGTTGAGGGAGTAAAGGGTAGTCCCATAACCTCACAATTTATAAAGGATATATCTGTGGCTAAGGATGTCAGAGTAAAAGTCATCCAAGATATTGCCACCCAAGCTAAGTTCTCTGAAGTCACAAAGAACTTCCTTCTTCTCCTTGCTGAGAATGGCAGACTTAAAAACGTAGATACCATTGCAAAGAGGTTTGCAGAGTTGGCAATGGCATATAAGGGAGAAGTGAAAGCAACCGTGACTACTGTCATTGCTCTTCCCCCTGAGGAGGAGAATGCATTGAAGCAGGCTGTTCAGGAAATGCTAGGTTCTGGGGCAAAGGTTAAGCTTGAACAGAAGATTGATCCAAGCATACTTGGTGGTCTAGTGCTGGAGTTCAGCCAAAAAGTCTTTGACATGTCGATAAAGTCTAGGGCACAACAGATGGAGAGGATCCTCCGGGAACCGGCAAACTATTCCATTTAG 735 0.4449 MAFYGRVKSGISLCNKLGLLSSQRSTLQRSLIAPSISQAFRNFADVPGQKETKIKVPIAMFGGSGNYASALYIAAVKVNAVDKVDSELLQFVEGVKGSPITSQFIKDISVAKDVRVKVIQDIATQAKFSEVTKNFLLLLAENGRLKNVDTIAKRFAELAMAYKGEVKATVTTVIALPPEEENALKQAVQEMLGSGAKVKLEQKIDPSILGGLVLEFSQKVFDMSIKSRAQQMERILREPANYSI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4443g00003 244 Gene3D - 63 156 IPR026015 -
Vifaun4443g00003 244 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 64 164 IPR026015 -
Vifaun4443g00003 244 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 198 217 IPR020781 GO:0015986|GO:0016020|GO:0046933
Vifaun4443g00003 244 Hamap ATP synthase subunit delta [atpD]. 59 238 IPR000711 GO:0015986|GO:0046933
Vifaun4443g00003 244 PRINTS ATP synthase delta subunit signature 196 211 IPR000711 GO:0015986|GO:0046933
Vifaun4443g00003 244 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Vifaun4443g00003 244 PRINTS ATP synthase delta subunit signature 211 229 IPR000711 GO:0015986|GO:0046933
Vifaun4443g00003 244 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Vifaun4443g00003 244 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Vifaun4443g00003 244 PANTHER ATP SYNTHASE DELTA CHAIN 43 238 IPR000711 GO:0015986|GO:0046933
Vifaun4443g00003 244 Pfam ATP synthase delta (OSCP) subunit 65 236 IPR000711 GO:0015986|GO:0046933
Vifaun4443g00003 244 NCBIfam ATP synthase F1 subunit delta 66 236 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4443g00003 103 243 Primary Pumps ATPases AT5G13450 58.865 7.81e-58 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4443g00003 K02137 - gmx:100790990 367.081