Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4332g00005 ATGGCAATTGTTTCTTGCAAGTTATTATTCTCCTTTTATTATTCTCTTGTCCTTCTTCTCATTATTATTGTATCCCAAACCAAAGCCCAGCCAGATTTTATATACAGATTTTGTATATACGATAAAGGAAACTACACAACCAGTACATTTCAAAAAAATCTCAACACCCTTTTAGTGTCTGTTGCTGTTGTTGCTGTTGCTATGCTAAGTTTCATTTACATATATTTAATGAGAAGAAAGACAAGAATAAATCGTGAAGAAATAGATCGAGAACACAATGATATTGAAAGAGGCCTTCTTTACCTTCACGAAGATTCTCGACTTCGTATTATACATCGTGATCTTAAAGCAAGTAATGTTCTTTTGGATAATAATATGAATCCTAAAATATCTGATTTTGGTATGGCCAGACTACTACTTGTTGATCAAACTCAAGTAAATACTGAAAAAGTCGTTGGAACATATGGATATATGGCTCCAGAATATGCGATGTTTGGACAATTTTCAATAAAATCAGATGTTTTTAGTTTTGGAGTACTAGTTCTAGAAATTATAAGTGGCCAAAAAGTTCGTAGCATTTTTCATGAGCAGAGTATGGAAGACTTACTTAGCTTTGTGTGGAGAAACTGGAGGGAGGGAACAATCACAAATATAATCGATCCATCATTAAACAATAGTTCACAAAATGCAATAATGAGATGCATTCACATTAGTTTACTATGTGTTCAAGAAAAAGTGGTTGAAAGGCCAACTATGGCAACTATTGCACTCATGCTTAGTAGTTATTCAGTCTCTTTACCGCTTCCTTTGGAGCCTGCATCTTTTATAGAAGGCAGCACTAGAAGTCTTTCAATTTCAAACATGCAATCTGGTGAAGATAGTGTAGGGATAATAAGTTCAAATCAATCCAAGAGTATATCAACAAATGAGGATTCAAGGGATGAAGGCACGGTGGTTCTGGCGGAGTTCAGTGCCGTCACCGGCAACACAGGCGCCGTCGCTCGTCGGTTACTCGAGAAGCTTCCTACCGAATCGGATTCCAGACTTTGCTTCTCTCAAGATAGATATATCTTCCACATACTCCGATCCGATGGCCTCGCGTACCTTTGTATGGCCAACGACACCTTCGGAAGACAAGAGGATTATAACAGATTAAGACCTTTGAGTTATCGTGGTGCCGATGTTTTCATTTTGGCTTTCTCCCTCATTAGCAAAGCCAGTTATGAAAATGTTTCCAAAAAGTGGATTCCAGAGTTGAAGCATTATGCACCTGGTGTTCCCATTATTCGGGATGACAAGCAGTTCTTTGTTGACCATCCTAATTTAGAACTATTTTTGACACGGGCAATGGAGAAACTTGACATTCAGAGATATACCAGGGAAGCTGGTTTGAGAAATTTGTTGGGAGGGTCAAACTTTTGCATTCTTCGGGATGACAAGCAGTTCTTTGTTGACCATCCTGGTGCTGTGCCCATTACCACTGATGTGATTTCTTCGGATGAACCTTTGCTTTGTGTGGATGACCTAGCTGATCAGGTTGCAGAAGTGCTTGATTTTTTCGGGCTAAGAGAGGTTATGTGCATGGGTGTAACAGCCGGTGCTTACATCCTCACACTATTTGCTATGAAATACAAAGAACGAGTGCTTGGATTGATTCTTGTTTCACCGATTTGTAAAGGACCTTCATGGACTGAATGGATTTACAACAAGGTCTTGATGAACTTATTGTACTTCTATGGTATGTGCGGTTTACTGAAGGAATGCCTCCTGCAACGTTACTTCAGTAAGGAGCTTAGATGCAGTATTGAGGGATCAGAATCAGAAGTAATACTAACTTGCCGAAGACTTCTGGATGAAAGGCAAAGTTTAAATGTCATGCGTTTTCTTCAAGCAGTTAATGCAAGGCGCGACCTCAGTGAGGGACTAAAGAACTTGCAATGCAAGACACTTATATTTGCAGGAGAGTAG 1968 0.3918 MAIVSCKLLFSFYYSLVLLLIIIVSQTKAQPDFIYRFCIYDKGNYTTSTFQKNLNTLLVSVAVVAVAMLSFIYIYLMRRKTRINREEIDREHNDIERGLLYLHEDSRLRIIHRDLKASNVLLDNNMNPKISDFGMARLLLVDQTQVNTEKVVGTYGYMAPEYAMFGQFSIKSDVFSFGVLVLEIISGQKVRSIFHEQSMEDLLSFVWRNWREGTITNIIDPSLNNSSQNAIMRCIHISLLCVQEKVVERPTMATIALMLSSYSVSLPLPLEPASFIEGSTRSLSISNMQSGEDSVGIISSNQSKSISTNEDSRDEGTVVLAEFSAVTGNTGAVARRLLEKLPTESDSRLCFSQDRYIFHILRSDGLAYLCMANDTFGRQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIIRDDKQFFVDHPNLELFLTRAMEKLDIQRYTREAGLRNLLGGSNFCILRDDKQFFVDHPGAVPITTDVISSDEPLLCVDDLADQVAEVLDFFGLREVMCMGVTAGAYILTLFAMKYKERVLGLILVSPICKGPSWTEWIYNKVLMNLLYFYGMCGLLKECLLQRYFSKELRCSIEGSESEVILTCRRLLDERQSLNVMRFLQAVNARRDLSEGLKNLQCKTLIFAGE 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4332g00005 655 Pfam Regulated-SNARE-like domain 334 380 IPR010908 -
Vifaun4332g00005 655 CDD Longin 312 405 IPR010908 -
Vifaun4332g00005 655 SUPERFAMILY Protein kinase-like (PK-like) 75 281 IPR011009 -
Vifaun4332g00005 655 Pfam Protein tyrosine and serine/threonine kinase 73 256 IPR001245 GO:0004672|GO:0006468
Vifaun4332g00005 655 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4332g00005 655 Gene3D Transferase(Phosphotransferase) domain 1 73 266 - -
Vifaun4332g00005 655 ProSiteProfiles Longin domain profile. 305 388 IPR010908 -
Vifaun4332g00005 655 Gene3D alpha/beta hydrolase 482 655 IPR029058 -
Vifaun4332g00005 655 ProSiteProfiles small GTPase Rho family profile. 225 517 - -
Vifaun4332g00005 655 SMART rho_sub_3 349 452 IPR001806 GO:0003924|GO:0005525
Vifaun4332g00005 655 Gene3D Longin domain 312 393 - -
Vifaun4332g00005 655 Pfam Ndr family 483 654 IPR004142 -
Vifaun4332g00005 655 SUPERFAMILY SNARE-like 313 379 IPR011012 -
Vifaun4332g00005 655 SMART Longin_2 333 408 IPR010908 -
Vifaun4332g00005 655 SMART serkin_6 35 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4332g00005 655 FunFam cysteine-rich receptor-like protein kinase 10 68 266 - -
Vifaun4332g00005 655 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 94 290 - -
Vifaun4332g00005 655 SUPERFAMILY alpha/beta-Hydrolases 503 655 IPR029058 -
Vifaun4332g00005 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 429 IPR027417 -
Vifaun4332g00005 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Vifaun4332g00005 655 Pfam Ras family 373 428 IPR001806 GO:0003924|GO:0005525
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4332g00005 95 291 Receptor kinase-like Gene Family AT4G21410 60.697 2.77e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vifaun4332g00005 Ndr 8.3e-52 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4332g00005 K18266 - gmx:100778625 310.457