Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4332g00002 ATGTCTATGCTTCCATTTCTTTGTTGTGTGTTTGTTATAATTATATCTCAAGCCAAAGCTGGAGATCCTGTATCATGTGATAACAACAGAGGCAATTACACAGCCAGTAGCACCTATGATAACAACCTTAAAACCCTTTTATCCACTTTCTCTTCTCATACAGAAATTAACTATGGTTTCTACAATTTCTCATACGGCCAAGATCCCGACAAAGTATATGCCATTGGATTGTGTCGTGGAGATATTGAACCAAACAATTGTCTCACAAACATAAACAATTCCTTTACCTATCTCAAACAACAATGTCCAAATCAAAAAGAGGCAATTGTGTGGAGTGGGAATTTAACTTTGTGGTACTCAAATCGTACAATATTTAGGATAGTAGAAACTTCGCCTGCAGATGATCTTATATCTACGAGCACTGTAACCGATGTGGACAAGTACAACGACGCACTGAATAAACTGTTGACAGATCTTAAAGACAACGCTGCATCAGGTGATTCCCGTCGTAAATATGATGCAAATCAGGTGTATGATAATTTGGAAACTATATATGGTACTGTGCAGTGTGTGCCTGCTTTAACATCGCAACAATGTATTGATTGCCTGGATGAAATAATTTTAGATATTCCAAGTTGTTGTAATGGCAAGAGGGGAACACACGTTCTTAAGCCAAGTTGCCGTCTTAGATATGAAACTTATCCCTTCTACAATCCTACCATTGAGTTAGACTCAGTTGCAACTCCACCATCACAATCCACTAATAACACTTCTTCAGGACACAACAAAACACGTACTGTCGTTGTCATCGCAGTGCTATTAGTTATTGTGGCTTTGGTAGCTATTCTTATTTGGTTCTGTTTGCAAGTGAGAAAACCAAAACACAGTTTTGAAGCTAACAATGAAGAATATGAAGAGGAAGAAGAAAGTGAAATAATGGTTGTTGAGTCATTGCAATTTAGCTTTGATACTATCCGAGTTGCTACAAATCACTTTTCAAATTCCAATAAAATTGGACATGGAGGATTCGGAGATGTTTATCAGGGTAAACTTTTGGATGGACAAATGATTGCGGTCAAAAGGTTATCAATAGATTCAGCTCAAGGAGACAAGGAATTTAAAAACGAAGTAACATTAGTAGCCAAACTTCAACATCGGAATTTAGTTAGACTACTTGGTTTCAGTCTTGAAGGAAGAGAAAGACTACTTATTTACGAGTTTGTTCTGAATAAAAGTCTAGATTACTTTATATTCGATCCAACAAAGAAAGCACTATTAAATTGGGGCAAGCGCTGCAAAATCATAAGGGGTATTGCACGAGGTCTTCTTTATCTTCACGAGGATTCTCGCTTGCGTATTATACATCGTGATCTCAAAGCAAGTAATGTTCTCTTAGACAATGAGATGAATCCTAAAATAGCTGATTTTGGAATGGCAAAGTTGTTTGTTATCGATCAAACTCAAGGCAATACTAATAGAATTGTTGGAACCTATGGATATATGGCACCTGAATATGCAATGCACGGACAATTTTCTGTAAAATCAGATGTATTTAGTTTTGGAGTATTGGTTCTTGAAATTATAAGTGGTCATAAAAACAGTACAGCTATTTATCTTGGAGACAATAGAGACGATGTCGACTACCTATTGAGCTATGCATGGAGAAGCTGGAAAGAGGGTAGAGCAACAAATATTATAGATCCATCATTAAACAACATTTCACAAAATGAAATAATGAGATATCTTCATATTGGTTTACTCTGTCTTCAAGAAGATGTAGAAGACAGACCAACGATGGCAAGTGTTGCACTCATGCTTAATAGTCATTCTCTCACTCTTTCAATACCTTCTAAACCTGCATATTTTTATGGAAGTGAAACTAGAAGCTTACAAAATATGCAAACACGGGATGAAAATCCTAATATAGCAACATCACGTGAATCAATTAACGAGGCTTCAATTACTGATCCATATCCTCGTTAG 1983 0.3641 MSMLPFLCCVFVIIISQAKAGDPVSCDNNRGNYTASSTYDNNLKTLLSTFSSHTEINYGFYNFSYGQDPDKVYAIGLCRGDIEPNNCLTNINNSFTYLKQQCPNQKEAIVWSGNLTLWYSNRTIFRIVETSPADDLISTSTVTDVDKYNDALNKLLTDLKDNAASGDSRRKYDANQVYDNLETIYGTVQCVPALTSQQCIDCLDEIILDIPSCCNGKRGTHVLKPSCRLRYETYPFYNPTIELDSVATPPSQSTNNTSSGHNKTRTVVVIAVLLVIVALVAILIWFCLQVRKPKHSFEANNEEYEEEEESEIMVVESLQFSFDTIRVATNHFSNSNKIGHGGFGDVYQGKLLDGQMIAVKRLSIDSAQGDKEFKNEVTLVAKLQHRNLVRLLGFSLEGRERLLIYEFVLNKSLDYFIFDPTKKALLNWGKRCKIIRGIARGLLYLHEDSRLRIIHRDLKASNVLLDNEMNPKIADFGMAKLFVIDQTQGNTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIISGHKNSTAIYLGDNRDDVDYLLSYAWRSWKEGRATNIIDPSLNNISQNEIMRYLHIGLLCLQEDVEDRPTMASVALMLNSHSLTLSIPSKPAYFYGSETRSLQNMQTRDENPNIATSRESINEASITDPYPR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4332g00002 660 Gene3D Transferase(Phosphotransferase) domain 1 409 615 - -
Vifaun4332g00002 660 ProSiteProfiles Gnk2-homologous domain profile. 130 236 IPR002902 -
Vifaun4332g00002 660 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Vifaun4332g00002 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Vifaun4332g00002 660 ProSiteProfiles Protein kinase domain profile. 332 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4332g00002 660 Pfam Salt stress response/antifungal 141 234 IPR002902 -
Vifaun4332g00002 660 Pfam Salt stress response/antifungal 26 121 IPR002902 -
Vifaun4332g00002 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 658 - -
Vifaun4332g00002 660 Pfam Protein kinase domain 333 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4332g00002 660 Gene3D - 23 123 IPR038408 -
Vifaun4332g00002 660 Gene3D - 132 236 IPR038408 -
Vifaun4332g00002 660 FunFam Cysteine-rich receptor-like protein kinase 10 294 407 - -
Vifaun4332g00002 660 FunFam Cysteine-rich receptor-like protein kinase 10 133 236 - -
Vifaun4332g00002 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 22 124 - -
Vifaun4332g00002 660 SUPERFAMILY Protein kinase-like (PK-like) 311 606 IPR011009 -
Vifaun4332g00002 660 MobiDBLite consensus disorder prediction 632 652 - -
Vifaun4332g00002 660 Gene3D Phosphorylase Kinase; domain 1 294 407 - -
Vifaun4332g00002 660 FunFam cysteine-rich receptor-like protein kinase 10 408 613 - -
Vifaun4332g00002 660 CDD STKc_IRAK 338 607 - -
Vifaun4332g00002 660 ProSiteProfiles Gnk2-homologous domain profile. 21 124 IPR002902 -
Vifaun4332g00002 660 SMART serkin_6 332 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4332g00002 660 MobiDBLite consensus disorder prediction 632 660 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4332g00002 29 621 Receptor kinase-like Gene Family AT4G21410 49.755 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vifaun4332g00002 Pkinase 1.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4332g00002 - - mtr:11442310 833.172