Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4332g00001 ATGGCGATGCTTTCCTTTTCCTTTCTTTGTTGTGTGTTTGTTATAATTCTATCCGAAGCCAAAGCTGGAGATCCTGTATCATGTGATAACAACAGAGGCAACTACACAGCCAATAGCATCTACGACAACAACCTTAAAACCCTTATATCCACTTTCTCTTCGCACAAACAAATCAACTACGGTTTCTACAATTTCTCTTACGGCCAAGATCCCGACAAAGCATACGCCATAGGATTATGTCGCGGAGATCTCGAACCAAACAAGTGTCTCACAAACATAAACAACTCCTTCACCTATCTCAAACAACAATGTCCAAATCAAAAAGAAGCAATTGTATGGGGTGGTGAATTCACTCTATGGTACTCAAACCGTTCAATTTTCGGAATAGTAGAAACTTCACCTACAACGTTTCTAATATATGAAATAGATGTTAGTGATGTGGATGCATACAACGAAGCATTGAGTAACTTGATGACAAATCTAACTGACAAAGCTGCGTCAGGTGACTCTAGACCGGTTTCTGAAATTCCGGTTTGTTGTAACGGGAAGATGGGAGGAAATATTCTTAAACCAAGTTGTCGGATTAGATTTGATCCTTATCGGTTCTATAATTCCACGATTGTGTTGGATTTTAATGCAACGCCTCCTTCACCGTCGCTACAGCCACCGTCAGTATTCACCAATAACACTTCACCGTCTACAAATAACAGTTCTTCTTCAGGGCAGAGCAAAATACGAATTGTCATCACCTCCATTGCAGTGCCAGCTCTTAGTGTGGTTTTGATACTCATTTTTATTTGCATCTATTTAAGATTGGGAAATCCAAAAAAAATGTTTTCAGCAAACATTAGAAAATATGATGATGGAGATGAAGATGAAATTATAATTGTTGAGTCATTACAATTCAACTTTGATATTATACGAGTCGCTACAAATGATTTCTCTGATTCTAACAAACTTGGGAGAGGTGGATTTGGAATTGTTTATCGGGGTAAACTTCCAGATGGACAAATGATTGCTGTCAAAAGATTGTTAGAAGAATCTAACCAAGGAGATGGAGAATTTAAAAATGAAGTATTATTAGTAGCCAGACTTCAACATCGAAACTTAGTTAGGCTACTTGGTTTCTGTTTAGAAGGGAGAGAAAGGCTGCTTATTTATGAATATGTTACAAATAAAAGTCTTGATTACTTCATATTTGATCCAATCAGGAAAGCTCAATTGAATTGGCAAAAGCGCTATGAAATCATAAAAGGTATTGCTCGAGGTCTTCTTTATCTTCATGAAGATTCTCGTTTGCGGATTATACACCGTGATATCAAAGCAAGCAATATTTTGTTAGACAATGACATGAATCCTAAGATATCTGATTTTGGATTGGCAAGATTGTTTGTTATTGATCAAAGTCAAGGGAATACAAAGAGAATCGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATAAATGGATTATTTTCAGCAAAATCAGATGTCTTTAGTTTTGGAGTATTGGTTCTTGAGATTATAAGCGGTCATAAAAATAGTGCAAACATTCGTCATGGAAATGATATTGAGTATCTATTGAGCTTTGCATGGAAAAGCTGGAGAGAGGGGAAATCATCAAATATTATAGATCCATCATTAAAGAACTTTTCATCAAATGAAATAATGAGATGCATTCATATTGGTTTGCTTTGTATTCAAGAAGATGCAGCTGATAGACCAACCATGGCAGCTGTTGCACTCATGCTTAATAGTTACTCTCTTAGTCTCACAGTACCTTTGAAACCTGCATACTTTTATGGAAGTGGAACTGGAACTGGAAGCTTACATGACAAGCAACTATGGGCTGAAAATCAAGATGCAACAACGTCGAATGAATCGATAAACCAGGCTTCAAATACTGATCCATACCCTCGGTAG 1926 0.3697 MAMLSFSFLCCVFVIILSEAKAGDPVSCDNNRGNYTANSIYDNNLKTLISTFSSHKQINYGFYNFSYGQDPDKAYAIGLCRGDLEPNKCLTNINNSFTYLKQQCPNQKEAIVWGGEFTLWYSNRSIFGIVETSPTTFLIYEIDVSDVDAYNEALSNLMTNLTDKAASGDSRPVSEIPVCCNGKMGGNILKPSCRIRFDPYRFYNSTIVLDFNATPPSPSLQPPSVFTNNTSPSTNNSSSSGQSKIRIVITSIAVPALSVVLILIFICIYLRLGNPKKMFSANIRKYDDGDEDEIIIVESLQFNFDIIRVATNDFSDSNKLGRGGFGIVYRGKLPDGQMIAVKRLLEESNQGDGEFKNEVLLVARLQHRNLVRLLGFCLEGRERLLIYEYVTNKSLDYFIFDPIRKAQLNWQKRYEIIKGIARGLLYLHEDSRLRIIHRDIKASNILLDNDMNPKISDFGLARLFVIDQSQGNTKRIVGTYGYMAPEYAINGLFSAKSDVFSFGVLVLEIISGHKNSANIRHGNDIEYLLSFAWKSWREGKSSNIIDPSLKNFSSNEIMRCIHIGLLCIQEDAADRPTMAAVALMLNSYSLSLTVPLKPAYFYGSGTGTGSLHDKQLWAENQDATTSNESINQASNTDPYPR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4332g00001 641 MobiDBLite consensus disorder prediction 621 641 - -
Vifaun4332g00001 641 Gene3D Phosphorylase Kinase; domain 1 278 389 - -
Vifaun4332g00001 641 Pfam Protein kinase domain 315 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4332g00001 641 Gene3D Transferase(Phosphotransferase) domain 1 390 593 - -
Vifaun4332g00001 641 SUPERFAMILY Protein kinase-like (PK-like) 299 602 IPR011009 -
Vifaun4332g00001 641 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 636 - -
Vifaun4332g00001 641 MobiDBLite consensus disorder prediction 219 241 - -
Vifaun4332g00001 641 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 126 - -
Vifaun4332g00001 641 FunFam Cysteine-rich receptor-like protein kinase 10 277 389 - -
Vifaun4332g00001 641 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4332g00001 641 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Vifaun4332g00001 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Vifaun4332g00001 641 SMART serkin_6 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifaun4332g00001 641 Pfam Salt stress response/antifungal 28 123 IPR002902 -
Vifaun4332g00001 641 Gene3D - 25 125 IPR038408 -
Vifaun4332g00001 641 FunFam cysteine-rich receptor-like protein kinase 10 390 592 - -
Vifaun4332g00001 641 ProSiteProfiles Gnk2-homologous domain profile. 23 126 IPR002902 -
Vifaun4332g00001 641 MobiDBLite consensus disorder prediction 223 241 - -
Vifaun4332g00001 641 CDD STKc_IRAK 320 586 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4332g00001 31 600 Receptor kinase-like Gene Family AT4G21410 46.935 1.36e-179 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vifaun4332g00001 Pkinase 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4332g00001 - - mtr:11442310 833.172