Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4226g00001 ATGTCTGAGAAGATTAATGTCTCAACCATAAAGCTTTTTGGGAGAACGATATTCATAACACACAACACTGATGTCCTTACCAATGATTCTACTCAACAGAATTCCACAAAACTTGATGATCAAAGTGATATGTCACAAGACAAATCTCCAATGAAACCAGACATGATTGTTCCATGTCCAAGATGCAAAAGCATGGAAACCAAATTCCGCTACTACAACAACTTCAAAGTCAAACAGCCAAGACACTTCTGCAAAAACTGCCAGAGATACTGGACTTCTGGAGGAACCGCCAGAAAGATGCTTGTAGGAGCAGGTCGCCGTAAGAACAAATTCACTAATTTTCCTTTAGATGTCTTGCATTATTCTCAAATGAGTAATGTCTCTTCAACTTCACCTGACAAAAACATGAATGTTGGATCATATGAAGAAACATTTGATAAGAGTTATCAAAGTTTTCCTCCACAGTTTTCATGGAACCCTGCAATTTGTTATCCCAATAAAGCATACTATGGTGGTTTCTTGCAACCATTTGTACCAACACAATCTTGTGGCCCAAGTCAACCTACACTAAGGAAACATTCAAGAGATCGAGACGTGATCATCTATTCCAACTCCGAGAAAGAAAAACTTGGCTTAAAAAGAAACAAAGAAAGACATGATAGTAATGAAGAATTGGTTCCTAAGTTACTAAGAGTTGACTACCCTAATGATGTTGTAATGAGTTCTATATGGTCAACAATAGGAATCGAGAATGGGAGAGGAATTTTCAAGGGGTTTGGATCAAACTCTGATGACAAGAATCATATTGTTGAAGCATCTTCATCAGTATTGAAAGTTAATCCTGCAGTTTTACCAAGCTCTATTGTGTTCCATGTGATGATTTGA 885 0.3729 MSEKINVSTIKLFGRTIFITHNTDVLTNDSTQQNSTKLDDQSDMSQDKSPMKPDMIVPCPRCKSMETKFRYYNNFKVKQPRHFCKNCQRYWTSGGTARKMLVGAGRRKNKFTNFPLDVLHYSQMSNVSSTSPDKNMNVGSYEETFDKSYQSFPPQFSWNPAICYPNKAYYGGFLQPFVPTQSCGPSQPTLRKHSRDRDVIIYSNSEKEKLGLKRNKERHDSNEELVPKLLRVDYPNDVVMSSIWSTIGIENGRGIFKGFGSNSDDKNHIVEASSSVLKVNPAVLPSSIVFHVMI 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4226g00001 294 Pfam Dof domain, zinc finger 56 110 IPR003851 GO:0003677|GO:0006355
Vifaun4226g00001 294 PANTHER CYCLIC DOF FACTOR 2 28 291 IPR045174 GO:0003700|GO:0006355
Vifaun4226g00001 294 MobiDBLite consensus disorder prediction 28 55 - -
Vifaun4226g00001 294 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4226g00001 9 291 C2C2-Dof Transcription Factor Family AT5G62430 39.355 3.46e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vifaun4226g00001 zf-Dof 3.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4226g00001 - K16222 psat:127121420 503.827