Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun4065g00001 ATGCTCAAAAATCGTTTTTTGATCGTGAATTTGGATACCCAATTGCAAAACCAAGCTAATGATATCAGTTTTGCTATGGATGCACACAACTCGGAGCACAGTCAAATAATTGAAATCAGTGTAGATCTTAATGATCCAGGAAGGAAGATTTGTGGGGAAGCACCATGTGGATTCTTAGATGCTGGATCCATCACTCTGGATTCCAAAGAACGTTCAACTTCCATGCGAAAGCTTTTGATAGCAGTGATCCTCTGTGTTATTTTCATGACCGTTGAACTAGTTGGTGCCTTTGCCATCTCCTTGTTTTCTTTATGGGCTGCCGGGTGGGAGGCTACTCCTCGTCAATCGTACGGGTTTTATAGAATAGAGATTCTCGGTGCTTTGGTTTCTATCCAATTGATATGGCTGCTTGCCGGGATTATTGTATACGAAGCCATAGATAGACTCATTACTGGTTCTAAAAATGTGGACGGGTTCATAATGTTTCTAGTCGCTGCATTTGGTCTTGTGGTTAACATAATCATGGCTGTGTTATTAGTTTCTACTCATGATCTTACAAAAGATGAGCACCATCATCATACTCATGACAACCACACTCACCATGACGAAGAAAATCATTCAGAAGATCAACACAATCATACTCACGAAGACCACATTCACCATCACACCGACGGAGGTGTTACTGAGCCACTTCTTGCCGAATCAAAAGACAAGTCCAAGAAGAAGCGAAACATAAATGTGCAAGGTGCTTATCTCCATGTACTCGGTGACTCCATCCAAAGTATCGGAGTAATGATTGGAGGAGCAGTGATATGGTACAAACCAGAATGGAAAATAGTTGATTTAATTTGCACTCTCATCTTTTCAGTAATTGTTTTAGGGACTACAATCAACATGTTGCGAAACATTTTGGAAGTTCTAATGGAAAGCACGCCTCGAGAGATCGATGCTACTCAGCTTGAAAGGGGGATATTAGATATTGAAGAAGTAGTGGCTGTTCATGAGCTGCACATTTGGGCCATTACAGTTGGGAAGATTTTATTAGCATGTCATGTTAAGATCAACCGGGATGCCGACGCTGACGTGGTGTTGGACAAGGTTGTAGACTATATCAAAAGGGTTTATAACATCAGTCATGTGACTATACAGATAGAGCGCTAG 1161 0.4126 MLKNRFLIVNLDTQLQNQANDISFAMDAHNSEHSQIIEISVDLNDPGRKICGEAPCGFLDAGSITLDSKERSTSMRKLLIAVILCVIFMTVELVGAFAISLFSLWAAGWEATPRQSYGFYRIEILGALVSIQLIWLLAGIIVYEAIDRLITGSKNVDGFIMFLVAAFGLVVNIIMAVLLVSTHDLTKDEHHHHTHDNHTHHDEENHSEDQHNHTHEDHIHHHTDGGVTEPLLAESKDKSKKKRNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWKIVDLICTLIFSVIVLGTTINMLRNILEVLMESTPREIDATQLERGILDIEEVVAVHELHIWAITVGKILLACHVKINRDADADVVLDKVVDYIKRVYNISHVTIQIER 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun4065g00001 386 NCBIfam cation diffusion facilitator family transporter 95 386 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vifaun4065g00001 386 Pfam Cation efflux family 94 308 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vifaun4065g00001 386 MobiDBLite consensus disorder prediction 189 227 - -
Vifaun4065g00001 386 SUPERFAMILY Cation efflux protein transmembrane domain-like 72 309 IPR027469 -
Vifaun4065g00001 386 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 314 385 IPR036837 -
Vifaun4065g00001 386 Gene3D Cation efflux protein transmembrane domain 74 307 IPR027469 -
Vifaun4065g00001 386 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 94 386 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun4065g00001 26 386 Inorganic Solute Cotransporters AT2G46800 64.322 8.34e-166 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun4065g00001 K14689 - gmx:100790458 527.709