Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun3822g00001 ATGGCAGATGAGGTGAAACTTTTGGGAGTGGTGGGAAGCCCGTTTGTGTGTAGAGTACAGATTGCTCTAAAATTGAAAGGAATTGAATACAAATTTGTTCAAGAAAACTTGGCCAACAAAAGTGATCAACTCCTTAAATATAATCCAGTTTATAAAAAGGTTCCCGTTTTTGTTCACAATGAGAAGCCTATATCAGAATCTCTTGTGATTATTGAGTACATTGATGAAGTTTGGAAAAACAATTCTATTTTTCCTTCTGATCCATATCATAGAGCCTTGGCTCGATTTTGGGCCAAGTTCATCGATGACAAGATAGTGACTCCTTCATTCAAGTCCGTTTTTACGGTTGATGAGAAAGAGCGTGAGAAGAGTATTGCAGAATCAACTGAGGCTCTTCAGATTCTTGAGAATGAGCTGAAAGAGAAGTTCTTTGGTGGAAAAGAATTTGGCTTTGTTGATATTGCTGCTGTGTTCATAGCATTCTGGATTCCATTGTTTCAAGACATTATAGGGCTGAAATTATTCACTGCTGAAAAATTTCCAAACCTTTATAAATGGAGCCAAGAATTCCTCAACCATCCAACTGTTAAGGAAATTATGCCTCCTAGAGACCCTCTTTTTTCCTTTTTCAAAGGCATCCATGATAAGCTTCATTCTTCTTCAAAATAG 669 0.3707 MADEVKLLGVVGSPFVCRVQIALKLKGIEYKFVQENLANKSDQLLKYNPVYKKVPVFVHNEKPISESLVIIEYIDEVWKNNSIFPSDPYHRALARFWAKFIDDKIVTPSFKSVFTVDEKEREKSIAESTEALQILENELKEKFFGGKEFGFVDIAAVFIAFWIPLFQDIIGLKLFTAEKFPNLYKWSQEFLNHPTVKEIMPPRDPLFSFFKGIHDKLHSSSK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun3822g00001 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 209 IPR010987 -
Vifaun3822g00001 222 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Vifaun3822g00001 222 Gene3D - 87 221 - -
Vifaun3822g00001 222 FunFam Tau class glutathione S-transferase 84 220 - -
Vifaun3822g00001 222 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
Vifaun3822g00001 222 CDD GST_N_Tau 5 78 - -
Vifaun3822g00001 222 FunFam Glutathione S-transferase GSTU6 1 85 - -
Vifaun3822g00001 222 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
Vifaun3822g00001 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vifaun3822g00001 222 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Vifaun3822g00001 222 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Vifaun3822g00001 222 Pfam Glutathione S-transferase, C-terminal domain 114 194 IPR004046 -
Vifaun3822g00001 222 Gene3D Glutaredoxin 1 86 - -
Vifaun3822g00001 222 Coils Coil 118 138 - -
Vifaun3822g00001 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 205 IPR045073 -
Vifaun3822g00001 222 CDD GST_C_Tau 88 213 IPR045074 GO:0004364|GO:0006749
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun3822g00001 3 220 Glutathione S-transferase Gene Family AT3G09270 48.416 2.60e-75 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun3822g00001 K00799 - gmx:100500680 345.51