Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun3760g00003 ATGTTGAGTTCTACCATAACACTTTGTGCACTCTTTTTTTTACTATTCATAATCTTCAAAATCCATCACCATAGACAAAAATGTTGCAAATACCCCATTTTAATAGATTATCCTTTTCTAGGCATGTTACCAACAGTTCTTTGGAAGTTATGGAATTTTCATGATTTCATAACCAAAGAATTGAAAAAGCACCATAGAGGCACTGCTGAGTTCTTGGGACCATGGTTTACCAACATGAACTATTTGGTTACTAGTGATCCCATCAACATGCATCACATTCTTAGCAAGTGTTTTGACAATTATGTGAAAGGTCGCGATTTTCGTGATATTTTTGAAGCTTTTGGAAATGGGATCTTTGTCGCAGATTCGGAGACATGGAAATACAATAGATCTCTTTTTCACTCTCTTTTCAAACAAAGAGGCTTTGAGTTTTTCCAAGAGAAAATTATTCAAAATAAGTTAGAAAGAAGCTTGATTCCATTGTTGGATCATGTACAACAGCAAAGTTCAGTGGTAGATTTACAAGATGTATTCAATCGCTTCACATTTGACAACATTTGTTCAATAATTCTCGGATGTGATCCCAATTGTCTTTCCATTGAACTTCCTGACGTTGCTTGTGAGAAGGCTTTTGACCAAATTGAAGAATGCATATTCTACAGGCATGCTATGCCAAAGAGTTTTTGGATGTTTCAAAAACTACTTCAAGTTGGCCAAGAGAAAAAAATGACAAAAGCATACAAAGAATTTGATCAATTTATATATGCTAGTATAGAGTCCAAAAGAGAGGACTTAAAAAACGGTGTAACAAATATTGAAACGAAAGACTTGTTAACAATTTTGATGAGAGACCAGAAAGGGTCGCAAGTAGTAGTTCATGATGATAAGTTTTTGAGGGATGCTACTTTCAATCTCTTTGTAGCAGGAAGAGATACAATAACTTCAGCACTAACATGGCTCTTTTATCTTATTGCTACACATCCTTTAGTAGAAGCCAAAATTCTTGAAGAGATTAAAGAAAATTTTGGGACTATTAATATTGAAAAGAAGTTAGGGGTTGATGACGTGAAAAAGCTAATTTACCTTCATGGTGCTATATGTGAGGCTGTAAGACTTTTTCCTCCAATACCCTTTGCGACAAAGCAAGCAATCAAAGCTGACATACTTCCAAGTGGCCACATTGTTAATCCTAATACAACCATACTATTTTCTATGTATTCAATGGGGAGATTTGAAGATGTATGGGGAAAAGATTGCTTGGAGTTCAAGCCAGAGAGATGGATATCTGAGAGAGGAGGCATTGTTTATGAACCATCTTATAAGTTCATTAGTTTTAATCCCGGACCTAGAACTTGTTTGGGAAAAGACTTGTCGTTCATTCAAATTAAGATGGTAACTGTTGCTATTTTGTGCAAATATCATATCCAAGTAGTGAAAGGTCATGTTCCTATCCCAAATCATTCAATTGTACTTCTTATGAAGAATGGTTTGAAGGTAAGGTTAGCAAAAAGAGAGATTTGA 1521 0.3498 MLSSTITLCALFFLLFIIFKIHHHRQKCCKYPILIDYPFLGMLPTVLWKLWNFHDFITKELKKHHRGTAEFLGPWFTNMNYLVTSDPINMHHILSKCFDNYVKGRDFRDIFEAFGNGIFVADSETWKYNRSLFHSLFKQRGFEFFQEKIIQNKLERSLIPLLDHVQQQSSVVDLQDVFNRFTFDNICSIILGCDPNCLSIELPDVACEKAFDQIEECIFYRHAMPKSFWMFQKLLQVGQEKKMTKAYKEFDQFIYASIESKREDLKNGVTNIETKDLLTILMRDQKGSQVVVHDDKFLRDATFNLFVAGRDTITSALTWLFYLIATHPLVEAKILEEIKENFGTINIEKKLGVDDVKKLIYLHGAICEAVRLFPPIPFATKQAIKADILPSGHIVNPNTTILFSMYSMGRFEDVWGKDCLEFKPERWISERGGIVYEPSYKFISFNPGPRTCLGKDLSFIQIKMVTVAILCKYHIQVVKGHVPIPNHSIVLLMKNGLKVRLAKREI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun3760g00003 506 Gene3D Cytochrome P450 17 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 SUPERFAMILY Cytochrome P450 37 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 CDD CYP86A 70 497 - -
Vifaun3760g00003 506 PANTHER CYTOCHROME P450 22 499 - -
Vifaun3760g00003 506 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vifaun3760g00003 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifaun3760g00003 506 Pfam Cytochrome P450 44 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun3760g00003 1 505 Cytochrome P450 AT2G23180 44.961 1.20e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun3760g00003 - - aprc:113867564 681.019