Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifaun3600g00001 | ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGATATTGCTGAAAAGAAAATGGAAAGCAAAGATTTCATAGGGGCTCGTACATTTGTCAATAAGGCTCAGAAACTATATCCCGATCTGGAGAATATCGCTCAAATGCTTGTTGTTTGCGATGTGCATTGCTCTGCCGAGCAAAAATTACTGGAAGCTGCATTTAAGCTGATTGGAGAAGCTCAAAGAGTTCTTTTGGATAGAGAAAAACGGTTATTACTTAACATGAGCTTGAGCAAGTTTTCAATGAGCAGAACTGCCATGCCATCTCATCAACGGAGTGTTCCAGTGAATTTTAATCCTGTAATGCAAACTAATTTCCGGCCCATTTTCACAAACATAAATCCTCAGCAGCCGCAACCGCAGCCACCACAATCGCAGCCGCTGCAACAGCAGCAGTCTAAGCAGCCAACTCAGCAGGGGCTTAATGGTGGTGGCGGTCCTACTTTTTGGACTATGTGCTCATTTTGTTCAGTGAAGTTTGAGTATTACCGGGTAGTTTTAAATAGATCTCTTCGCTGTCAACGTTGCAGCAAGCCCTTTGTTGCATATGAGGTGGATCCGCATGGTACAAAACCAGCAACTACAGCAACTAATTCAAGTCGGAAAGCTTTTGGCCATCAGAACAATACTACTCCGATTCATGTTGCTTTTAAGGTTGATGTTGGATCTCAAGGTGGTTTGCATGCTCAGAGGTCCAATAAAGAGTCTCATCATAAGAAAGGCTCTACTTCAAATGTCTCTGCAAAGCCAATTGGAAAGAGAAAGAGAAAGCATGTAGTACATTCCAGGGAAAGTTCTGAGTCTATAGGCAGCACTGATTCTGAATCTGAAGATGATTTATTTTCTAACAACGGTTTTCCTGGTGTTTCGACTTCTACAGAAGAGCGTCCACGTAGATCTACGCGGCAAAAGCACCAGGTTTCGTACAACGAGAATGTAAGTGACGATGATGGTGAGTTGGAACCTTCAAAACAGGGTAAGGAAAGTGTTTCACCTCATAGTGATCACGAAAATAATCGGGAGGAAACTGAAACAAATGATCAGAATGGTTTGGCTGCTGGTCTGAAAGATGATTTAAAAGGGGTAAAGCAGCAGAAGCAAAAAATTTATTCTGAAGAGAGCTTAAAAAATATAGATGTGAAAACTAAGGAGGTGGGAGGAAAAGAAACAGCGGGCAGCTCAAAGATAGATGAAGTTTCAGAACATTCAGACTCCAAATCATCAAATCATTCAGATGGTTTTGTTTATCCCGATCCAGAGTTCAGTGACTTTGACAAAGACAAGAAAGAGGGATGTTTCACTCCCGGGCAGATTTGGGCTGTTTATGATGATACAGATGGCATGCCTAGATTCTATGCTCTAATCAAAAAAGTTTTTTCTCCTGGATTCAAGTTGCAGATAACTTGGCTTGAGGCAGATCCTGATGACGAAGATGAACACAGGTGGATTGAGGAGAAACTGCCAAGTGCCTGTGGGAAATATAAACTTGTGTATCCTAGGAAAGGGGAAACTTGGGCTCTTTTTAAGAATTGGGATATTAAATGGTATATGGATGCTGAATCTCATCAGAAGTATGATTTGGAATATGTTGAGATCTTGTCGGATTATGTTGAAGGTGCAGGAGTAATTGTTGCATACTTGGCTAAGTTGAAAGGTTATGTGAGCCTCTTCTCTCGAATTACGAATGGAGGTAACCAACCATTTCAAATATCACCAGCTGAGTTGTTCAGATTCTCTCATAGAATTCCATCTTTTAAAATGACTGGTCAGGAAAGAGCAGGCGTTCCTGAAGGATCTTATGAACTCGATCCTATATCCTTACCGATAGAAGAGATTAGCGGTCCTGATGATTTAGAAGTGAACGTTGTATCTTCTGCCAAGGTGAATTTGGAAAGAAGCAATTCAGTAGAGGAGAAGGGTCCTGTTGATCATATTGGTGATGTTAGTGCTCCATCAGCTTTGGTCCCAGATTCTTTTGAAGTTCCAGACCCTTCGTTTTACCAATTTGATGCTGAGAGGTCCCATGAAAAGTTTGAGGCTGGCCAGATTTGGGCATTTTATGGTGACGAGGACGAACTTCCAAAATACTACGGCCAGATTAAAGGGGTTAGGAGGATTGGCCCAAAAATTGAGTTGGAAGTATTTTATCTTACTGACTGCTGGCTACCTAAGAAAGTTATTAAATGGGATGACAAAGATATGATCATTTCTTGTGGAAGATTTAAAATCAAGCCAAATGCCAAGCTATGCACTTACAGCAACACCAATTCTATTTCACATCAGGTGCATGCTAGTTCTGTTGGAACGAACAACGACTATGAAATTTTTCCACGGAAGGGTGAAGTTTGGGCATTATATAGGAACTGGACGACTAAAATCAAACGTTCTGATTTGAAAAACTGGAAGTACGACATAGTGGAAATTATTGAAGACGGTGATATGTGGACAGATGTTTTGTTTCTAGAGAAGGTGAGTGGTTACAGTTCAGTTTTTAAGGGCAAGTTAAATAGCGGAGGATCAACGATGACCATGACGATCTCAAAGGATGAGCTGCTCAAATTCTCCCACAAGATACCTGCTTTCAAACTTACAGAAGAACATGGCAACAATCTGAGAGGCTTCTGGGAACTTGATCCCGGTGCAATACCGCAACATTATCTTAGCAAGGAATGA | 2709 | 0.4131 | MDCNKEEALRAKDIAEKKMESKDFIGARTFVNKAQKLYPDLENIAQMLVVCDVHCSAEQKLLEAAFKLIGEAQRVLLDREKRLLLNMSLSKFSMSRTAMPSHQRSVPVNFNPVMQTNFRPIFTNINPQQPQPQPPQSQPLQQQQSKQPTQQGLNGGGGPTFWTMCSFCSVKFEYYRVVLNRSLRCQRCSKPFVAYEVDPHGTKPATTATNSSRKAFGHQNNTTPIHVAFKVDVGSQGGLHAQRSNKESHHKKGSTSNVSAKPIGKRKRKHVVHSRESSESIGSTDSESEDDLFSNNGFPGVSTSTEERPRRSTRQKHQVSYNENVSDDDGELEPSKQGKESVSPHSDHENNREETETNDQNGLAAGLKDDLKGVKQQKQKIYSEESLKNIDVKTKEVGGKETAGSSKIDEVSEHSDSKSSNHSDGFVYPDPEFSDFDKDKKEGCFTPGQIWAVYDDTDGMPRFYALIKKVFSPGFKLQITWLEADPDDEDEHRWIEEKLPSACGKYKLVYPRKGETWALFKNWDIKWYMDAESHQKYDLEYVEILSDYVEGAGVIVAYLAKLKGYVSLFSRITNGGNQPFQISPAELFRFSHRIPSFKMTGQERAGVPEGSYELDPISLPIEEISGPDDLEVNVVSSAKVNLERSNSVEEKGPVDHIGDVSAPSALVPDSFEVPDPSFYQFDAERSHEKFEAGQIWAFYGDEDELPKYYGQIKGVRRIGPKIELEVFYLTDCWLPKKVIKWDDKDMIISCGRFKIKPNAKLCTYSNTNSISHQVHASSVGTNNDYEIFPRKGEVWALYRNWTTKIKRSDLKNWKYDIVEIIEDGDMWTDVLFLEKVSGYSSVFKGKLNSGGSTMTMTISKDELLKFSHKIPAFKLTEEHGNNLRGFWELDPGAIPQHYLSKE | 902 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 397 | 434 | - | - | |
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 283 | 306 | - | - | |
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 198 | 219 | - | - | |
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 397 | 420 | - | - | |
| Vifaun3600g00001 | 902 | PANTHER | DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED | 509 | 895 | - | - | |
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 238 | 373 | - | - | |
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 307 | 356 | - | - | |
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 122 | 155 | - | - | |
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 138 | 155 | - | - | |
| Vifaun3600g00001 | 902 | MobiDBLite | consensus disorder prediction | 203 | 219 | - | - | |
| Vifaun3600g00001 | 902 | Pfam | Domain of unknown function (DUF3444) | 426 | 508 | IPR024593 | - | |
| Vifaun3600g00001 | 902 | Pfam | Domain of unknown function (DUF3444) | 509 | 603 | IPR024593 | - | |
| Vifaun3600g00001 | 902 | Pfam | Domain of unknown function (DUF3444) | 669 | 878 | IPR024593 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vifaun3600g00001 | 4 | 197 | SUVH1 or 3-interacting DNAJ domain-containing protein superfamily | AT2G01710 | 26.887 | 3.13e-09 | 58.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifaun3600g00001 | - | - | psat:127079111 | 1556.96 |