Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun3381g00002 ATGACCACTTTCCCATATTTAATTTCCTTAATCATCCTCGTATCATTATGTAAAACAAAAAGTGAAGATTCCACATGTGGAACATCATCATGCGAAACATTTGGACTTCAAATCCGGTTCCCGTTTTCAACAAACCAACCAAATCAAACCAATCTATGTAGGTACCCCGGTTTCGAACTCACATGTAGCAACACCACCACCTTGAGTGAACCACTACTCACTCTTCCCAACTCCGAAACCTTTGTTGTGAAACACATATCTTTCATTGACCAGACAGTTTGGGTCAACGATCCCAACAAGTGTCTTCCCAAACGTTTCATGTCCGACAAGCATCATGGTTTCATGTCAAACCTTAAAGATTCACCGTTTCGGTTAAGTGACTATTACACTTTCGTTAACGTTTCGTTCCTAAAATGTCCCTCGAATTCAACTGTCTCATCTATGTTACATGGCATCAGTTGTTTGAACCTTGATTACCCGGTGGTGGCTATGAGGTCTGATGAAACTCCGTTTGCTACTCCATGGGTAGCTTTGTGTGAGTTTATTACGTCGGCTATGGTACCTGTTGAAGACACGAATTGGTTGTTCTGGAATGGTTATTACTCTAATATAGCGTTGCAGTGGGATAATCCAGATTGTGGAAGTTGTGAAGAACGTGGAGGAACTTGTGGTTGGTTGAGGAAGATCGTCTTCGTCTTGCTTGTTATGAACTTCGCACACGAGTCAAATAATCTATCTTATATTCATTTTCATTCATTTTTTGTTCAAGTTTAG 774 0.4044 MTTFPYLISLIILVSLCKTKSEDSTCGTSSCETFGLQIRFPFSTNQPNQTNLCRYPGFELTCSNTTTLSEPLLTLPNSETFVVKHISFIDQTVWVNDPNKCLPKRFMSDKHHGFMSNLKDSPFRLSDYYTFVNVSFLKCPSNSTVSSMLHGISCLNLDYPVVAMRSDETPFATPWVALCEFITSAMVPVEDTNWLFWNGYYSNIALQWDNPDCGSCEERGGTCGWLRKIVFVLLVMNFAHESNNLSYIHFHSFFVQV 257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifaun3381g00002 257 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 227 IPR046948 -
Vifaun3381g00002 257 Pfam Wall-associated receptor kinase galacturonan-binding 26 97 IPR025287 GO:0030247
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun3381g00002 21 225 C3H Transcription Factor Family AT2G46495 28.774 2.39e-18 81.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun3381g00002 - - mtr:25502189 322.013